Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPAQ5VT25 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC21.03■□□□□ 0.96
CDC42BPAQ5VT25 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC21.03■□□□□ 0.96
CDC42BPAQ5VT25 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42BPAQ5VT25 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC21.03■□□□□ 0.96
CDC42BPAQ5VT25 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42BPAQ5VT25 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42BPAQ5VT25 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42BPAQ5VT25 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC21.03■□□□□ 0.96
CDC42BPAQ5VT25 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42BPAQ5VT25 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42BPAQ5VT25 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CDC42BPAQ5VT25 CD37-203ENST00000426897 1204 ntTSL 2 BASIC21.03■□□□□ 0.96
CDC42BPAQ5VT25 AC005077.3-201ENST00000449614 213 ntBASIC21.03■□□□□ 0.96
CDC42BPAQ5VT25 RNU1-80P-201ENST00000459500 161 ntBASIC21.03■□□□□ 0.96
CDC42BPAQ5VT25 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC21.03■□□□□ 0.96
CDC42BPAQ5VT25 METTL7AP1-201ENST00000547343 496 ntBASIC21.03■□□□□ 0.96
CDC42BPAQ5VT25 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC21.03■□□□□ 0.96
CDC42BPAQ5VT25 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC21.03■□□□□ 0.96
CDC42BPAQ5VT25 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CDC42BPAQ5VT25 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC21.03■□□□□ 0.96
CDC42BPAQ5VT25 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42BPAQ5VT25 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42BPAQ5VT25 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42BPAQ5VT25 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42BPAQ5VT25 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42BPAQ5VT25 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
CDC42BPAQ5VT25 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42BPAQ5VT25 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.02■□□□□ 0.96
CDC42BPAQ5VT25 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CDC42BPAQ5VT25 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42BPAQ5VT25 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42BPAQ5VT25 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC21.02■□□□□ 0.96
CDC42BPAQ5VT25 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC21.02■□□□□ 0.96
CDC42BPAQ5VT25 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC21.02■□□□□ 0.96
CDC42BPAQ5VT25 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC21.02■□□□□ 0.96
CDC42BPAQ5VT25 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC21.02■□□□□ 0.96
CDC42BPAQ5VT25 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC21.02■□□□□ 0.96
CDC42BPAQ5VT25 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42BPAQ5VT25 AC005746.3-201ENST00000614751 393 ntBASIC21.02■□□□□ 0.96
CDC42BPAQ5VT25 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC21.02■□□□□ 0.96
CDC42BPAQ5VT25 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42BPAQ5VT25 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42BPAQ5VT25 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42BPAQ5VT25 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC21.02■□□□□ 0.96
CDC42BPAQ5VT25 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42BPAQ5VT25 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
CDC42BPAQ5VT25 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CDC42BPAQ5VT25 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 AC010086.2-201ENST00000428616 226 ntBASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 IGHEP1-201ENST00000521393 651 ntBASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 OR7E155P-201ENST00000412208 1014 ntBASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42BPAQ5VT25 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDC42BPAQ5VT25 GOLGA8EP-201ENST00000530246 1959 ntBASIC21■□□□□ 0.95
CDC42BPAQ5VT25 AC144831.1-201ENST00000573312 2656 ntBASIC21■□□□□ 0.95
CDC42BPAQ5VT25 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CDC42BPAQ5VT25 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDC42BPAQ5VT25 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDC42BPAQ5VT25 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC21■□□□□ 0.95
CDC42BPAQ5VT25 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CDC42BPAQ5VT25 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC21■□□□□ 0.95
CDC42BPAQ5VT25 STK16-202ENST00000409260 1493 ntTSL 5 BASIC21■□□□□ 0.95
CDC42BPAQ5VT25 RCC2P5-201ENST00000492126 1487 ntBASIC21■□□□□ 0.95
CDC42BPAQ5VT25 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CDC42BPAQ5VT25 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CDC42BPAQ5VT25 LILRP2-202ENST00000413572 1383 ntBASIC21■□□□□ 0.95
CDC42BPAQ5VT25 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDC42BPAQ5VT25 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDC42BPAQ5VT25 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDC42BPAQ5VT25 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CDC42BPAQ5VT25 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDC42BPAQ5VT25 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC21■□□□□ 0.95
CDC42BPAQ5VT25 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC21■□□□□ 0.95
CDC42BPAQ5VT25 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms