Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
ALFQ53S48 AC090386.2-201ENST00000623010 1039 ntBASIC14.84□□□□□ -0.03
ALFQ53S48 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.84□□□□□ -0.03
ALFQ53S48 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
ALFQ53S48 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ALFQ53S48 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.84□□□□□ -0.03
ALFQ53S48 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ALFQ53S48 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.84□□□□□ -0.03
ALFQ53S48 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.84□□□□□ -0.03
ALFQ53S48 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ALFQ53S48 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ALFQ53S48 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ALFQ53S48 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.84□□□□□ -0.03
ALFQ53S48 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.84□□□□□ -0.03
ALFQ53S48 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ALFQ53S48 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.84□□□□□ -0.03
ALFQ53S48 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ALFQ53S48 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ALFQ53S48 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ALFQ53S48 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ALFQ53S48 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.84□□□□□ -0.03
ALFQ53S48 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ALFQ53S48 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ALFQ53S48 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ALFQ53S48 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ALFQ53S48 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
ALFQ53S48 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
ALFQ53S48 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ALFQ53S48 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
ALFQ53S48 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ALFQ53S48 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ALFQ53S48 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
ALFQ53S48 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ALFQ53S48 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ALFQ53S48 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.83□□□□□ -0.04
ALFQ53S48 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
ALFQ53S48 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ALFQ53S48 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ALFQ53S48 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.83□□□□□ -0.04
ALFQ53S48 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.83□□□□□ -0.04
ALFQ53S48 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ALFQ53S48 AC005089.1-201ENST00000619486 2241 ntBASIC14.83□□□□□ -0.04
ALFQ53S48 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ALFQ53S48 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ALFQ53S48 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.83□□□□□ -0.04
ALFQ53S48 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
ALFQ53S48 AL596276.2-201ENST00000447525 331 ntBASIC14.83□□□□□ -0.04
ALFQ53S48 RN7SL11P-201ENST00000471305 293 ntBASIC14.83□□□□□ -0.04
ALFQ53S48 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.83□□□□□ -0.04
ALFQ53S48 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.83□□□□□ -0.04
ALFQ53S48 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.83□□□□□ -0.04
ALFQ53S48 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.83□□□□□ -0.04
ALFQ53S48 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.83□□□□□ -0.04
ALFQ53S48 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ALFQ53S48 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.83□□□□□ -0.04
ALFQ53S48 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ALFQ53S48 NAP1L6-202ENST00000641404 1222 ntBASIC14.83□□□□□ -0.04
ALFQ53S48 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ALFQ53S48 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
ALFQ53S48 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.83□□□□□ -0.04
ALFQ53S48 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
ALFQ53S48 LINC01165-201ENST00000445190 1623 ntBASIC14.83□□□□□ -0.04
ALFQ53S48 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ALFQ53S48 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ALFQ53S48 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ALFQ53S48 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ALFQ53S48 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.83□□□□□ -0.04
ALFQ53S48 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
ALFQ53S48 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ALFQ53S48 AC008132.1-202ENST00000342005 1389 ntBASIC14.83□□□□□ -0.04
ALFQ53S48 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ALFQ53S48 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.83□□□□□ -0.04
ALFQ53S48 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ALFQ53S48 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ALFQ53S48 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
ALFQ53S48 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ALFQ53S48 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.83□□□□□ -0.04
ALFQ53S48 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ALFQ53S48 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.83□□□□□ -0.04
ALFQ53S48 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ALFQ53S48 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ALFQ53S48 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.82□□□□□ -0.04
ALFQ53S48 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ALFQ53S48 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ALFQ53S48 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ALFQ53S48 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ALFQ53S48 AL133338.1-201ENST00000565695 1517 ntBASIC14.82□□□□□ -0.04
ALFQ53S48 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.82□□□□□ -0.04
ALFQ53S48 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ALFQ53S48 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ALFQ53S48 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ALFQ53S48 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ALFQ53S48 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ALFQ53S48 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ALFQ53S48 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ALFQ53S48 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
ALFQ53S48 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.82□□□□□ -0.04
ALFQ53S48 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ALFQ53S48 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.82□□□□□ -0.04
ALFQ53S48 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms