Protein–RNA interactions for Protein: P62273

RPS29, 40S ribosomal protein S29, humanhuman

Known RBP Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS29P62273 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RPS29P62273 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RPS29P62273 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RPS29P62273 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
RPS29P62273 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RPS29P62273 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RPS29P62273 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
RPS29P62273 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
RPS29P62273 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
RPS29P62273 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
RPS29P62273 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 MBP-201ENST00000354542 575 ntTSL 2 BASIC8.16□□□□□ -1.1
RPS29P62273 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC8.16□□□□□ -1.1
RPS29P62273 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 ELK2AP-201ENST00000392510 1007 ntBASIC8.16□□□□□ -1.1
RPS29P62273 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
RPS29P62273 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC8.16□□□□□ -1.1
RPS29P62273 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 CYP46A4P-201ENST00000414953 267 ntBASIC8.16□□□□□ -1.1
RPS29P62273 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC8.16□□□□□ -1.1
RPS29P62273 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC8.16□□□□□ -1.1
RPS29P62273 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC8.16□□□□□ -1.1
RPS29P62273 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC8.16□□□□□ -1.1
RPS29P62273 CALR4P-201ENST00000431943 946 ntBASIC8.16□□□□□ -1.1
RPS29P62273 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC8.16□□□□□ -1.1
RPS29P62273 LINC01165-201ENST00000445190 1623 ntBASIC8.16□□□□□ -1.1
RPS29P62273 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
RPS29P62273 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
RPS29P62273 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC8.16□□□□□ -1.1
RPS29P62273 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 AC116345.2-201ENST00000512837 523 ntBASIC8.16□□□□□ -1.1
RPS29P62273 COQ10BP2-201ENST00000513804 724 ntBASIC8.16□□□□□ -1.1
RPS29P62273 AC114947.1-202ENST00000514136 344 ntBASIC8.16□□□□□ -1.1
RPS29P62273 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
RPS29P62273 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC8.16□□□□□ -1.1
RPS29P62273 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC8.16□□□□□ -1.1
RPS29P62273 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC8.16□□□□□ -1.1
RPS29P62273 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC8.16□□□□□ -1.1
RPS29P62273 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC8.16□□□□□ -1.1
RPS29P62273 CMC2-204ENST00000562713 573 ntTSL 3 BASIC8.16□□□□□ -1.1
RPS29P62273 CMC2-209ENST00000565108 399 ntTSL 2 BASIC8.16□□□□□ -1.1
RPS29P62273 MIR4525-201ENST00000580000 75 ntBASIC8.16□□□□□ -1.1
RPS29P62273 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
RPS29P62273 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC8.16□□□□□ -1.1
RPS29P62273 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC8.16□□□□□ -1.1
RPS29P62273 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC8.16□□□□□ -1.1
RPS29P62273 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
RPS29P62273 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC8.16□□□□□ -1.1
RPS29P62273 AC023908.3-201ENST00000564211 3047 ntBASIC8.16□□□□□ -1.1
RPS29P62273 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
RPS29P62273 USP39-220ENST00000613444 2161 ntTSL 2 BASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms