Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.52□□□□□ -0.09
AP1S1P61966 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.52□□□□□ -0.09
AP1S1P61966 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
AP1S1P61966 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.52□□□□□ -0.09
AP1S1P61966 LINC01165-201ENST00000445190 1623 ntBASIC14.52□□□□□ -0.09
AP1S1P61966 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.52□□□□□ -0.09
AP1S1P61966 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP1S1P61966 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.51□□□□□ -0.09
AP1S1P61966 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
AP1S1P61966 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
AP1S1P61966 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
AP1S1P61966 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.51□□□□□ -0.09
AP1S1P61966 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
AP1S1P61966 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
AP1S1P61966 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
AP1S1P61966 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
AP1S1P61966 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.51□□□□□ -0.09
AP1S1P61966 FRMPD2B-201ENST00000431305 1347 ntBASIC14.51□□□□□ -0.09
AP1S1P61966 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.51□□□□□ -0.09
AP1S1P61966 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
AP1S1P61966 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.51□□□□□ -0.09
AP1S1P61966 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
AP1S1P61966 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 RNA5SP359-201ENST00000364838 113 ntBASIC14.51□□□□□ -0.09
AP1S1P61966 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
AP1S1P61966 ACTG1P2-201ENST00000415776 1125 ntBASIC14.51□□□□□ -0.09
AP1S1P61966 ACTG1P11-201ENST00000425411 1125 ntBASIC14.51□□□□□ -0.09
AP1S1P61966 AC006335.1-201ENST00000445200 547 ntBASIC14.51□□□□□ -0.09
AP1S1P61966 RN7SL530P-201ENST00000485097 298 ntBASIC14.51□□□□□ -0.09
AP1S1P61966 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.51□□□□□ -0.09
AP1S1P61966 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
AP1S1P61966 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
AP1S1P61966 AL161670.2-201ENST00000557650 1227 ntBASIC14.51□□□□□ -0.09
AP1S1P61966 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 AL022334.2-201ENST00000610000 484 ntBASIC14.51□□□□□ -0.09
AP1S1P61966 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.51□□□□□ -0.09
AP1S1P61966 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
AP1S1P61966 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.51□□□□□ -0.09
AP1S1P61966 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.51□□□□□ -0.09
AP1S1P61966 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 AL133338.1-201ENST00000565695 1517 ntBASIC14.51□□□□□ -0.09
AP1S1P61966 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP1S1P61966 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S1P61966 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S1P61966 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.5□□□□□ -0.09
AP1S1P61966 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S1P61966 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S1P61966 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S1P61966 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S1P61966 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S1P61966 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
AP1S1P61966 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S1P61966 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S1P61966 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S1P61966 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
AP1S1P61966 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.5□□□□□ -0.09
AP1S1P61966 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.5□□□□□ -0.09
AP1S1P61966 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S1P61966 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S1P61966 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S1P61966 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S1P61966 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S1P61966 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S1P61966 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S1P61966 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S1P61966 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S1P61966 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S1P61966 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
AP1S1P61966 Z97180.1-201ENST00000445173 988 ntBASIC14.5□□□□□ -0.09
AP1S1P61966 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP1S1P61966 POU5F1P2-201ENST00000521750 823 ntBASIC14.5□□□□□ -0.09
AP1S1P61966 AC093752.3-201ENST00000567343 901 ntBASIC14.5□□□□□ -0.09
AP1S1P61966 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.5□□□□□ -0.09
AP1S1P61966 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms