Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC10.82□□□□□ -0.68
HIST1H2BDP58876 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
HIST1H2BDP58876 AC011498.5-201ENST00000592027 486 ntBASIC10.82□□□□□ -0.68
HIST1H2BDP58876 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC10.82□□□□□ -0.68
HIST1H2BDP58876 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC10.82□□□□□ -0.68
HIST1H2BDP58876 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC10.82□□□□□ -0.68
HIST1H2BDP58876 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC10.82□□□□□ -0.68
HIST1H2BDP58876 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
HIST1H2BDP58876 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
HIST1H2BDP58876 MTHFSD-201ENST00000360900 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
HIST1H2BDP58876 DNAJC9-201ENST00000372950 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
HIST1H2BDP58876 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
HIST1H2BDP58876 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
HIST1H2BDP58876 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
HIST1H2BDP58876 ATIC-201ENST00000236959 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
HIST1H2BDP58876 SIGLEC11-203ENST00000447370 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
HIST1H2BDP58876 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
HIST1H2BDP58876 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
HIST1H2BDP58876 DQX1-201ENST00000393951 2540 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
HIST1H2BDP58876 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC10.82□□□□□ -0.68
HIST1H2BDP58876 ARHGAP36-202ENST00000370921 2447 ntTSL 2 BASIC10.82□□□□□ -0.68
HIST1H2BDP58876 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 RBM39-203ENST00000361162 2831 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 TRIM68-201ENST00000300747 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 TTC16-201ENST00000373289 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 PML-207ENST00000435786 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 MYO19-203ENST00000610930 3271 ntTSL 5 BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 ARMCX2-203ENST00000356824 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 KRT17P6-201ENST00000453795 1220 ntBASIC10.81□□□□□ -0.68
HIST1H2BDP58876 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 YBX1P2-201ENST00000489612 999 ntBASIC10.81□□□□□ -0.68
HIST1H2BDP58876 FXR1-221ENST00000491674 365 ntTSL 2 BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 TMA16-209ENST00000513272 803 ntTSL 2 BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 SUOX-214ENST00000551841 906 ntTSL 3 BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 NTF6B-201ENST00000591913 560 ntBASIC10.81□□□□□ -0.68
HIST1H2BDP58876 AC138894.3-201ENST00000603787 634 ntBASIC10.81□□□□□ -0.68
HIST1H2BDP58876 SOX13-203ENST00000367204 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 DGKZ-220ENST00000532868 3118 ntTSL 2 BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 MATN2-218ENST00000524308 3449 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 GGTA1P-205ENST00000495328 3478 ntTSL 2 BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 TK2-206ENST00000527800 2687 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 SLC25A5-AS1-203ENST00000446986 1874 ntTSL 2 BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
HIST1H2BDP58876 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 ARL4C-201ENST00000339728 3385 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 GRN-214ENST00000589265 1632 ntTSL 5 BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 LINC01561-201ENST00000369071 2176 ntBASIC10.8□□□□□ -0.68
HIST1H2BDP58876 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 AC091178.1-201ENST00000583447 2305 ntTSL 2 BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 DNAI2-202ENST00000446837 2474 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 AL136172.1-201ENST00000598590 1394 ntBASIC10.8□□□□□ -0.68
HIST1H2BDP58876 CR2-203ENST00000367059 3877 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 PHC2-203ENST00000373422 2799 ntTSL 2 BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 RTFDC1-202ENST00000357348 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 APOL3-205ENST00000397293 2214 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HIST1H2BDP58876 AL391294.1-201ENST00000641352 4068 ntBASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms