Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
WNT3P56703 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
WNT3P56703 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
WNT3P56703 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
WNT3P56703 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
WNT3P56703 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
WNT3P56703 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
WNT3P56703 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
WNT3P56703 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.67□□□□□ -0.22
WNT3P56703 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
WNT3P56703 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
WNT3P56703 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.67□□□□□ -0.22
WNT3P56703 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
WNT3P56703 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
WNT3P56703 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
WNT3P56703 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.66□□□□□ -0.22
WNT3P56703 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
WNT3P56703 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.66□□□□□ -0.22
WNT3P56703 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.66□□□□□ -0.22
WNT3P56703 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.66□□□□□ -0.22
WNT3P56703 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
WNT3P56703 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.66□□□□□ -0.22
WNT3P56703 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.66□□□□□ -0.22
WNT3P56703 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
WNT3P56703 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.66□□□□□ -0.22
WNT3P56703 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.66□□□□□ -0.22
WNT3P56703 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.66□□□□□ -0.22
WNT3P56703 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.66□□□□□ -0.22
WNT3P56703 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.66□□□□□ -0.22
WNT3P56703 ST13P19-201ENST00000442505 1124 ntBASIC13.66□□□□□ -0.22
WNT3P56703 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.66□□□□□ -0.22
WNT3P56703 CNN2P10-201ENST00000443067 918 ntBASIC13.66□□□□□ -0.22
WNT3P56703 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.66□□□□□ -0.22
WNT3P56703 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.66□□□□□ -0.22
WNT3P56703 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
WNT3P56703 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
WNT3P56703 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
WNT3P56703 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.66□□□□□ -0.22
WNT3P56703 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
WNT3P56703 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.66□□□□□ -0.22
WNT3P56703 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
WNT3P56703 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
WNT3P56703 TUBB1P2-201ENST00000422712 1306 ntBASIC13.65□□□□□ -0.22
WNT3P56703 TUBB1P1-201ENST00000503144 1300 ntBASIC13.65□□□□□ -0.22
WNT3P56703 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
WNT3P56703 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
WNT3P56703 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
WNT3P56703 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
WNT3P56703 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
WNT3P56703 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
WNT3P56703 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
WNT3P56703 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
WNT3P56703 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.65□□□□□ -0.22
WNT3P56703 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
WNT3P56703 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
WNT3P56703 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.65□□□□□ -0.22
WNT3P56703 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.65□□□□□ -0.22
WNT3P56703 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.65□□□□□ -0.22
WNT3P56703 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
WNT3P56703 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
WNT3P56703 DUX4L46-201ENST00000566845 751 ntBASIC13.65□□□□□ -0.22
WNT3P56703 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.65□□□□□ -0.22
WNT3P56703 RN7SL560P-201ENST00000577943 264 ntBASIC13.65□□□□□ -0.22
WNT3P56703 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.65□□□□□ -0.22
WNT3P56703 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
WNT3P56703 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
WNT3P56703 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.65□□□□□ -0.22
WNT3P56703 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
WNT3P56703 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms