Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
SUMO3P55854 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SUMO3P55854 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SUMO3P55854 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SUMO3P55854 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SUMO3P55854 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.05□□□□□ -0.32
SUMO3P55854 KRT8P13-201ENST00000463294 1010 ntBASIC13.05□□□□□ -0.32
SUMO3P55854 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.05□□□□□ -0.32
SUMO3P55854 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.05□□□□□ -0.32
SUMO3P55854 SCARNA20.5-201ENST00000516991 142 ntBASIC13.05□□□□□ -0.32
SUMO3P55854 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.05□□□□□ -0.32
SUMO3P55854 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.05□□□□□ -0.32
SUMO3P55854 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.05□□□□□ -0.32
SUMO3P55854 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.05□□□□□ -0.32
SUMO3P55854 AL451050.2-201ENST00000606967 682 ntBASIC13.05□□□□□ -0.32
SUMO3P55854 AC026740.1-201ENST00000607068 791 ntBASIC13.05□□□□□ -0.32
SUMO3P55854 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.05□□□□□ -0.32
SUMO3P55854 BAP1-211ENST00000615113 489 ntBASIC13.05□□□□□ -0.32
SUMO3P55854 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
SUMO3P55854 AC244452.3-201ENST00000636814 210 ntBASIC13.05□□□□□ -0.32
SUMO3P55854 AL805961.1-203ENST00000641078 1258 ntBASIC13.05□□□□□ -0.32
SUMO3P55854 NAP1L6-202ENST00000641404 1222 ntBASIC13.05□□□□□ -0.32
SUMO3P55854 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SUMO3P55854 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SUMO3P55854 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SUMO3P55854 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SUMO3P55854 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.05□□□□□ -0.32
SUMO3P55854 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SUMO3P55854 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.05□□□□□ -0.32
SUMO3P55854 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.05□□□□□ -0.32
SUMO3P55854 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SUMO3P55854 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SUMO3P55854 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.05□□□□□ -0.32
SUMO3P55854 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.05□□□□□ -0.32
SUMO3P55854 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
SUMO3P55854 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SUMO3P55854 KRT8P21-201ENST00000430398 1491 ntBASIC13.04□□□□□ -0.32
SUMO3P55854 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.04□□□□□ -0.32
SUMO3P55854 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.04□□□□□ -0.32
SUMO3P55854 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.04□□□□□ -0.32
SUMO3P55854 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SUMO3P55854 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SUMO3P55854 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SUMO3P55854 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SUMO3P55854 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SUMO3P55854 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SUMO3P55854 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SUMO3P55854 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SUMO3P55854 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.04□□□□□ -0.32
SUMO3P55854 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SUMO3P55854 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
SUMO3P55854 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SUMO3P55854 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SUMO3P55854 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SUMO3P55854 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SUMO3P55854 HMGA1P1-201ENST00000415560 1062 ntBASIC13.04□□□□□ -0.32
SUMO3P55854 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.04□□□□□ -0.32
SUMO3P55854 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.04□□□□□ -0.32
SUMO3P55854 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SUMO3P55854 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SUMO3P55854 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SUMO3P55854 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.04□□□□□ -0.32
SUMO3P55854 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SUMO3P55854 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SUMO3P55854 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.04□□□□□ -0.32
SUMO3P55854 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
SUMO3P55854 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.04□□□□□ -0.32
SUMO3P55854 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
SUMO3P55854 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.04□□□□□ -0.32
SUMO3P55854 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.04□□□□□ -0.32
SUMO3P55854 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.04□□□□□ -0.32
SUMO3P55854 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SUMO3P55854 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.04□□□□□ -0.32
SUMO3P55854 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
SUMO3P55854 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SUMO3P55854 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.04□□□□□ -0.32
SUMO3P55854 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.04□□□□□ -0.32
SUMO3P55854 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SUMO3P55854 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.04□□□□□ -0.32
SUMO3P55854 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SUMO3P55854 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SUMO3P55854 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.04□□□□□ -0.32
SUMO3P55854 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.04□□□□□ -0.32
SUMO3P55854 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
SUMO3P55854 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.04□□□□□ -0.32
SUMO3P55854 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
SUMO3P55854 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.04□□□□□ -0.32
SUMO3P55854 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.04□□□□□ -0.32
SUMO3P55854 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.04□□□□□ -0.32
SUMO3P55854 AC138028.6-201ENST00000616106 1482 ntBASIC13.04□□□□□ -0.32
SUMO3P55854 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SUMO3P55854 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.03□□□□□ -0.32
SUMO3P55854 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SUMO3P55854 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
SUMO3P55854 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SUMO3P55854 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SUMO3P55854 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SUMO3P55854 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SUMO3P55854 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.03□□□□□ -0.32
SUMO3P55854 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms