Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC13.23□□□□□ -0.29
SSR4P51571 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC13.23□□□□□ -0.29
SSR4P51571 AC079328.1-201ENST00000560358 952 ntBASIC13.23□□□□□ -0.29
SSR4P51571 AC093752.3-201ENST00000567343 901 ntBASIC13.23□□□□□ -0.29
SSR4P51571 PHBP15-201ENST00000574228 665 ntBASIC13.23□□□□□ -0.29
SSR4P51571 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
SSR4P51571 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SSR4P51571 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSR4P51571 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC13.23□□□□□ -0.29
SSR4P51571 AC084346.2-201ENST00000607097 949 ntBASIC13.23□□□□□ -0.29
SSR4P51571 AC106881.1-201ENST00000605849 3329 ntBASIC13.23□□□□□ -0.29
SSR4P51571 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSR4P51571 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SSR4P51571 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.23□□□□□ -0.29
SSR4P51571 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SSR4P51571 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.23□□□□□ -0.29
SSR4P51571 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSR4P51571 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSR4P51571 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSR4P51571 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.23□□□□□ -0.29
SSR4P51571 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSR4P51571 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSR4P51571 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSR4P51571 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.23□□□□□ -0.29
SSR4P51571 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.23□□□□□ -0.29
SSR4P51571 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.23□□□□□ -0.29
SSR4P51571 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.23□□□□□ -0.29
SSR4P51571 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.23□□□□□ -0.29
SSR4P51571 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
SSR4P51571 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.22□□□□□ -0.29
SSR4P51571 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.22□□□□□ -0.29
SSR4P51571 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.22□□□□□ -0.29
SSR4P51571 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SSR4P51571 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
SSR4P51571 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SSR4P51571 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SSR4P51571 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.22□□□□□ -0.29
SSR4P51571 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
SSR4P51571 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
SSR4P51571 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
SSR4P51571 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.22□□□□□ -0.29
SSR4P51571 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC13.22□□□□□ -0.29
SSR4P51571 RPSAP15-201ENST00000448168 861 ntBASIC13.22□□□□□ -0.29
SSR4P51571 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC13.22□□□□□ -0.29
SSR4P51571 RN7SL67P-201ENST00000492147 296 ntBASIC13.22□□□□□ -0.29
SSR4P51571 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.22□□□□□ -0.29
SSR4P51571 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC13.22□□□□□ -0.29
SSR4P51571 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.22□□□□□ -0.29
SSR4P51571 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.22□□□□□ -0.29
SSR4P51571 AL133499.1-201ENST00000596207 608 ntBASIC13.22□□□□□ -0.29
SSR4P51571 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.22□□□□□ -0.29
SSR4P51571 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.22□□□□□ -0.29
SSR4P51571 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.22□□□□□ -0.29
SSR4P51571 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.22□□□□□ -0.29
SSR4P51571 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.22□□□□□ -0.29
SSR4P51571 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SSR4P51571 AP001267.2-201ENST00000532619 2086 ntBASIC13.22□□□□□ -0.29
SSR4P51571 AC232323.1-201ENST00000540724 2099 ntBASIC13.22□□□□□ -0.29
SSR4P51571 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.22□□□□□ -0.29
SSR4P51571 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
SSR4P51571 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
SSR4P51571 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSR4P51571 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.22□□□□□ -0.29
SSR4P51571 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SSR4P51571 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SSR4P51571 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.21□□□□□ -0.29
SSR4P51571 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSR4P51571 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSR4P51571 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.21□□□□□ -0.29
SSR4P51571 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.21□□□□□ -0.29
SSR4P51571 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SSR4P51571 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms