Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CSNK1DP48730 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CSNK1DP48730 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1DP48730 AC006987.1-201ENST00000413610 527 ntBASIC14.39□□□□□ -0.11
CSNK1DP48730 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1DP48730 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.39□□□□□ -0.11
CSNK1DP48730 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.39□□□□□ -0.11
CSNK1DP48730 DUTP3-201ENST00000450025 415 ntBASIC14.39□□□□□ -0.11
CSNK1DP48730 RN7SL769P-201ENST00000469386 295 ntBASIC14.39□□□□□ -0.11
CSNK1DP48730 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1DP48730 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.39□□□□□ -0.11
CSNK1DP48730 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.39□□□□□ -0.11
CSNK1DP48730 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.39□□□□□ -0.11
CSNK1DP48730 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.39□□□□□ -0.11
CSNK1DP48730 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.39□□□□□ -0.11
CSNK1DP48730 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.39□□□□□ -0.11
CSNK1DP48730 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.39□□□□□ -0.11
CSNK1DP48730 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1DP48730 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1DP48730 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.39□□□□□ -0.11
CSNK1DP48730 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1DP48730 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1DP48730 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1DP48730 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1DP48730 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1DP48730 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1DP48730 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1DP48730 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1DP48730 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CSNK1DP48730 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CSNK1DP48730 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CSNK1DP48730 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.38□□□□□ -0.11
CSNK1DP48730 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CSNK1DP48730 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1DP48730 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1DP48730 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1DP48730 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1DP48730 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CSNK1DP48730 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1DP48730 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1DP48730 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1DP48730 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1DP48730 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.38□□□□□ -0.11
CSNK1DP48730 AC026748.1-201ENST00000624349 3251 ntBASIC14.38□□□□□ -0.11
CSNK1DP48730 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1DP48730 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.38□□□□□ -0.11
CSNK1DP48730 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1DP48730 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1DP48730 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CSNK1DP48730 BX679664.3-201ENST00000414070 555 ntBASIC14.38□□□□□ -0.11
CSNK1DP48730 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.38□□□□□ -0.11
CSNK1DP48730 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1DP48730 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1DP48730 AC113935.1-201ENST00000471722 555 ntBASIC14.38□□□□□ -0.11
CSNK1DP48730 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.38□□□□□ -0.11
CSNK1DP48730 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.38□□□□□ -0.11
CSNK1DP48730 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.38□□□□□ -0.11
CSNK1DP48730 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.38□□□□□ -0.11
CSNK1DP48730 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.38□□□□□ -0.11
CSNK1DP48730 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.38□□□□□ -0.11
CSNK1DP48730 AL021578.1-201ENST00000613646 709 ntBASIC14.38□□□□□ -0.11
CSNK1DP48730 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.38□□□□□ -0.11
CSNK1DP48730 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1DP48730 CICP16-201ENST00000502609 2813 ntBASIC14.38□□□□□ -0.11
CSNK1DP48730 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1DP48730 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
CSNK1DP48730 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1DP48730 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1DP48730 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1DP48730 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1DP48730 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1DP48730 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.38□□□□□ -0.11
CSNK1DP48730 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1DP48730 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1DP48730 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1DP48730 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1DP48730 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1DP48730 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
CSNK1DP48730 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.37□□□□□ -0.11
CSNK1DP48730 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1DP48730 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.37□□□□□ -0.11
CSNK1DP48730 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1DP48730 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1DP48730 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1DP48730 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1DP48730 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1DP48730 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CSNK1DP48730 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1DP48730 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.37□□□□□ -0.11
CSNK1DP48730 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1DP48730 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1DP48730 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.37□□□□□ -0.11
CSNK1DP48730 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1DP48730 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.37□□□□□ -0.11
CSNK1DP48730 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.37□□□□□ -0.11
CSNK1DP48730 UPF3AP2-201ENST00000457924 1132 ntBASIC14.37□□□□□ -0.11
CSNK1DP48730 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1DP48730 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.37□□□□□ -0.11
CSNK1DP48730 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CSNK1DP48730 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms