Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
APOBEC1P41238 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOBEC1P41238 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOBEC1P41238 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.07□□□□□ -0.32
APOBEC1P41238 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.07□□□□□ -0.32
APOBEC1P41238 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOBEC1P41238 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOBEC1P41238 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOBEC1P41238 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOBEC1P41238 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOBEC1P41238 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOBEC1P41238 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOBEC1P41238 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOBEC1P41238 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
APOBEC1P41238 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOBEC1P41238 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.07□□□□□ -0.32
APOBEC1P41238 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOBEC1P41238 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
APOBEC1P41238 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOBEC1P41238 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
APOBEC1P41238 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.07□□□□□ -0.32
APOBEC1P41238 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOBEC1P41238 AC117489.1-201ENST00000625169 3217 ntBASIC13.07□□□□□ -0.32
APOBEC1P41238 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOBEC1P41238 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOBEC1P41238 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
APOBEC1P41238 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOBEC1P41238 DPM3-202ENST00000368399 517 ntBASIC13.07□□□□□ -0.32
APOBEC1P41238 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.07□□□□□ -0.32
APOBEC1P41238 MIR1908-201ENST00000410394 80 ntBASIC13.07□□□□□ -0.32
APOBEC1P41238 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.07□□□□□ -0.32
APOBEC1P41238 SERPINA13P-202ENST00000478994 924 ntBASIC13.07□□□□□ -0.32
APOBEC1P41238 AC005740.2-201ENST00000511085 419 ntBASIC13.07□□□□□ -0.32
APOBEC1P41238 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
APOBEC1P41238 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.07□□□□□ -0.32
APOBEC1P41238 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.07□□□□□ -0.32
APOBEC1P41238 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.07□□□□□ -0.32
APOBEC1P41238 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.07□□□□□ -0.32
APOBEC1P41238 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.07□□□□□ -0.32
APOBEC1P41238 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.07□□□□□ -0.32
APOBEC1P41238 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOBEC1P41238 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.07□□□□□ -0.32
APOBEC1P41238 AC090164.2-201ENST00000611487 516 ntBASIC13.07□□□□□ -0.32
APOBEC1P41238 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.07□□□□□ -0.32
APOBEC1P41238 AC068587.8-201ENST00000641239 219 ntBASIC13.07□□□□□ -0.32
APOBEC1P41238 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
APOBEC1P41238 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
APOBEC1P41238 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
APOBEC1P41238 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOBEC1P41238 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.07□□□□□ -0.32
APOBEC1P41238 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.07□□□□□ -0.32
APOBEC1P41238 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOBEC1P41238 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
APOBEC1P41238 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOBEC1P41238 AL359881.3-201ENST00000602640 1721 ntBASIC13.07□□□□□ -0.32
APOBEC1P41238 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.07□□□□□ -0.32
APOBEC1P41238 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOBEC1P41238 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.07□□□□□ -0.32
APOBEC1P41238 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOBEC1P41238 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOBEC1P41238 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
APOBEC1P41238 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.07□□□□□ -0.32
APOBEC1P41238 KRT8P24-201ENST00000560290 1559 ntBASIC13.07□□□□□ -0.32
APOBEC1P41238 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOBEC1P41238 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOBEC1P41238 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOBEC1P41238 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.06□□□□□ -0.32
APOBEC1P41238 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.06□□□□□ -0.32
APOBEC1P41238 AC005840.4-201ENST00000541242 2494 ntBASIC13.06□□□□□ -0.32
APOBEC1P41238 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOBEC1P41238 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
APOBEC1P41238 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
APOBEC1P41238 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOBEC1P41238 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOBEC1P41238 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOBEC1P41238 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
APOBEC1P41238 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOBEC1P41238 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.06□□□□□ -0.32
APOBEC1P41238 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOBEC1P41238 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOBEC1P41238 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOBEC1P41238 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
APOBEC1P41238 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOBEC1P41238 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOBEC1P41238 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOBEC1P41238 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
APOBEC1P41238 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.06□□□□□ -0.32
APOBEC1P41238 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
APOBEC1P41238 KRT18P36-201ENST00000411618 1276 ntBASIC13.06□□□□□ -0.32
APOBEC1P41238 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.06□□□□□ -0.32
APOBEC1P41238 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
APOBEC1P41238 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.06□□□□□ -0.32
APOBEC1P41238 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.06□□□□□ -0.32
APOBEC1P41238 AC104306.2-201ENST00000451877 341 ntBASIC13.06□□□□□ -0.32
APOBEC1P41238 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.06□□□□□ -0.32
APOBEC1P41238 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOBEC1P41238 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.06□□□□□ -0.32
APOBEC1P41238 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.06□□□□□ -0.32
APOBEC1P41238 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOBEC1P41238 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms