Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CEACAM3P40198 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CEACAM3P40198 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CEACAM3P40198 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CEACAM3P40198 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
CEACAM3P40198 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CEACAM3P40198 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
CEACAM3P40198 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CEACAM3P40198 AMT-239ENST00000636865 1914 ntTSL 5 BASIC11.88□□□□□ -0.51
CEACAM3P40198 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CEACAM3P40198 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CEACAM3P40198 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
CEACAM3P40198 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CEACAM3P40198 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 LINC00552-201ENST00000625151 2579 ntBASIC11.87□□□□□ -0.51
CEACAM3P40198 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC11.87□□□□□ -0.51
CEACAM3P40198 E2F3P2-201ENST00000447755 1422 ntBASIC11.87□□□□□ -0.51
CEACAM3P40198 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CEACAM3P40198 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC11.87□□□□□ -0.51
CEACAM3P40198 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC11.87□□□□□ -0.51
CEACAM3P40198 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC11.87□□□□□ -0.51
CEACAM3P40198 GAS5-209ENST00000430245 723 ntTSL 3 BASIC11.87□□□□□ -0.51
CEACAM3P40198 PTPA-218ENST00000435132 618 ntTSL 2 BASIC11.87□□□□□ -0.51
CEACAM3P40198 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CEACAM3P40198 AC106794.1-201ENST00000506935 792 ntBASIC11.87□□□□□ -0.51
CEACAM3P40198 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 RNF41-210ENST00000552244 716 ntTSL 3 BASIC11.87□□□□□ -0.51
CEACAM3P40198 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC11.87□□□□□ -0.51
CEACAM3P40198 RN7SL219P-201ENST00000582872 296 ntBASIC11.87□□□□□ -0.51
CEACAM3P40198 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC11.87□□□□□ -0.51
CEACAM3P40198 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC11.87□□□□□ -0.51
CEACAM3P40198 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CEACAM3P40198 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CEACAM3P40198 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC11.87□□□□□ -0.51
CEACAM3P40198 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC11.87□□□□□ -0.51
CEACAM3P40198 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.87□□□□□ -0.51
CEACAM3P40198 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC11.87□□□□□ -0.51
CEACAM3P40198 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
CEACAM3P40198 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC11.87□□□□□ -0.51
CEACAM3P40198 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CEACAM3P40198 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
CEACAM3P40198 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CEACAM3P40198 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC11.87□□□□□ -0.51
CEACAM3P40198 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
CEACAM3P40198 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CEACAM3P40198 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 AL008718.2-201ENST00000609206 1313 ntBASIC11.86□□□□□ -0.51
CEACAM3P40198 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CEACAM3P40198 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
CEACAM3P40198 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC11.86□□□□□ -0.51
CEACAM3P40198 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CEACAM3P40198 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CEACAM3P40198 AC006504.5-208ENST00000588784 2401 ntBASIC11.86□□□□□ -0.51
CEACAM3P40198 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 TNN-203ENST00000622870 3719 ntTSL 5 BASIC11.86□□□□□ -0.51
CEACAM3P40198 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CEACAM3P40198 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms