Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.72□□□□□ -0.21
NCK1P16333 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NCK1P16333 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NCK1P16333 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
NCK1P16333 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NCK1P16333 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC13.72□□□□□ -0.21
NCK1P16333 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 ACTBP8-201ENST00000403258 1108 ntBASIC13.72□□□□□ -0.21
NCK1P16333 AC004890.2-204ENST00000481968 304 ntBASIC13.72□□□□□ -0.21
NCK1P16333 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.72□□□□□ -0.21
NCK1P16333 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.72□□□□□ -0.21
NCK1P16333 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.72□□□□□ -0.21
NCK1P16333 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.72□□□□□ -0.21
NCK1P16333 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.72□□□□□ -0.21
NCK1P16333 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.72□□□□□ -0.21
NCK1P16333 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NCK1P16333 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
NCK1P16333 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.72□□□□□ -0.21
NCK1P16333 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.72□□□□□ -0.21
NCK1P16333 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
NCK1P16333 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NCK1P16333 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
NCK1P16333 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
NCK1P16333 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NCK1P16333 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NCK1P16333 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NCK1P16333 AP002761.4-201ENST00000565433 3361 ntBASIC13.71□□□□□ -0.21
NCK1P16333 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NCK1P16333 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
NCK1P16333 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
NCK1P16333 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.71□□□□□ -0.21
NCK1P16333 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.71□□□□□ -0.21
NCK1P16333 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
NCK1P16333 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NCK1P16333 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
NCK1P16333 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NCK1P16333 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NCK1P16333 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
NCK1P16333 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NCK1P16333 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NCK1P16333 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NCK1P16333 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NCK1P16333 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
NCK1P16333 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
NCK1P16333 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NCK1P16333 SOCS2P1-201ENST00000417727 557 ntBASIC13.71□□□□□ -0.21
NCK1P16333 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NCK1P16333 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NCK1P16333 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.71□□□□□ -0.21
NCK1P16333 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NCK1P16333 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.71□□□□□ -0.21
NCK1P16333 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.71□□□□□ -0.21
NCK1P16333 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.71□□□□□ -0.21
NCK1P16333 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.71□□□□□ -0.21
NCK1P16333 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.71□□□□□ -0.21
NCK1P16333 AP005019.2-201ENST00000615104 511 ntBASIC13.71□□□□□ -0.21
NCK1P16333 AC005252.2-201ENST00000624630 1141 ntBASIC13.71□□□□□ -0.21
NCK1P16333 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NCK1P16333 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NCK1P16333 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NCK1P16333 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
NCK1P16333 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NCK1P16333 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NCK1P16333 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC13.71□□□□□ -0.22
NCK1P16333 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
NCK1P16333 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
NCK1P16333 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NCK1P16333 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
NCK1P16333 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.71□□□□□ -0.22
NCK1P16333 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.71□□□□□ -0.22
NCK1P16333 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
NCK1P16333 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.71□□□□□ -0.22
NCK1P16333 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.71□□□□□ -0.22
NCK1P16333 LINC00567-201ENST00000569854 3409 ntBASIC13.71□□□□□ -0.22
NCK1P16333 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NCK1P16333 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
NCK1P16333 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.71□□□□□ -0.22
NCK1P16333 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NCK1P16333 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NCK1P16333 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms