Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.12□□□□□ -0.31
CLUP10909 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.12□□□□□ -0.31
CLUP10909 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CLUP10909 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 AC072061.1-201ENST00000569710 2234 ntBASIC13.12□□□□□ -0.31
CLUP10909 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.12□□□□□ -0.31
CLUP10909 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CLUP10909 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLUP10909 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.11□□□□□ -0.31
CLUP10909 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CLUP10909 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC13.11□□□□□ -0.31
CLUP10909 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.11□□□□□ -0.31
CLUP10909 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CLUP10909 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
CLUP10909 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
CLUP10909 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.11□□□□□ -0.31
CLUP10909 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
CLUP10909 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
CLUP10909 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.11□□□□□ -0.31
CLUP10909 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.11□□□□□ -0.31
CLUP10909 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.11□□□□□ -0.31
CLUP10909 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.11□□□□□ -0.31
CLUP10909 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.11□□□□□ -0.31
CLUP10909 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 AC092183.1-201ENST00000469884 875 ntBASIC13.11□□□□□ -0.31
CLUP10909 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.11□□□□□ -0.31
CLUP10909 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.11□□□□□ -0.31
CLUP10909 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.11□□□□□ -0.31
CLUP10909 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.11□□□□□ -0.31
CLUP10909 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CLUP10909 BX088702.1-201ENST00000610784 235 ntBASIC13.11□□□□□ -0.31
CLUP10909 AC006538.3-201ENST00000612495 578 ntBASIC13.11□□□□□ -0.31
CLUP10909 ENPP7P14-201ENST00000621765 1040 ntBASIC13.11□□□□□ -0.31
CLUP10909 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.11□□□□□ -0.31
CLUP10909 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CLUP10909 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CLUP10909 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CLUP10909 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.11□□□□□ -0.31
CLUP10909 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CLUP10909 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLUP10909 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.11□□□□□ -0.31
CLUP10909 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CLUP10909 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.11□□□□□ -0.31
CLUP10909 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLUP10909 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLUP10909 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CLUP10909 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.1□□□□□ -0.31
CLUP10909 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLUP10909 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLUP10909 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.1□□□□□ -0.31
CLUP10909 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.1□□□□□ -0.31
CLUP10909 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLUP10909 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.1□□□□□ -0.31
CLUP10909 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLUP10909 DGCR9-201ENST00000609630 2415 ntBASIC13.1□□□□□ -0.31
CLUP10909 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLUP10909 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.1□□□□□ -0.31
CLUP10909 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLUP10909 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CLUP10909 AL365181.3-201ENST00000605886 3222 ntBASIC13.1□□□□□ -0.31
CLUP10909 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLUP10909 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLUP10909 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLUP10909 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLUP10909 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.1□□□□□ -0.31
CLUP10909 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms