Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
CD28P10747 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
CD28P10747 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC11.34□□□□□ -0.59
CD28P10747 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
CD28P10747 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
CD28P10747 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC11.34□□□□□ -0.59
CD28P10747 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC11.34□□□□□ -0.59
CD28P10747 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC11.34□□□□□ -0.59
CD28P10747 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC11.34□□□□□ -0.59
CD28P10747 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC11.34□□□□□ -0.59
CD28P10747 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC11.34□□□□□ -0.59
CD28P10747 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC11.34□□□□□ -0.59
CD28P10747 AC026316.1-201ENST00000398900 414 ntBASIC11.34□□□□□ -0.59
CD28P10747 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
CD28P10747 KRT18P36-201ENST00000411618 1276 ntBASIC11.34□□□□□ -0.59
CD28P10747 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC11.34□□□□□ -0.59
CD28P10747 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC11.34□□□□□ -0.59
CD28P10747 TSPY25P-201ENST00000429463 745 ntBASIC11.34□□□□□ -0.59
CD28P10747 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 LDHBP1-201ENST00000455730 1119 ntBASIC11.34□□□□□ -0.59
CD28P10747 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC11.34□□□□□ -0.59
CD28P10747 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 AC008267.1-201ENST00000474858 1069 ntBASIC11.34□□□□□ -0.59
CD28P10747 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC11.34□□□□□ -0.59
CD28P10747 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC11.34□□□□□ -0.59
CD28P10747 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
CD28P10747 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC11.34□□□□□ -0.59
CD28P10747 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC11.34□□□□□ -0.59
CD28P10747 IQSEC3P1-201ENST00000538799 536 ntBASIC11.34□□□□□ -0.59
CD28P10747 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC11.34□□□□□ -0.59
CD28P10747 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC11.34□□□□□ -0.59
CD28P10747 NAT9-220ENST00000582870 896 ntTSL 5 BASIC11.34□□□□□ -0.59
CD28P10747 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC11.34□□□□□ -0.59
CD28P10747 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
CD28P10747 AC073352.2-201ENST00000609385 439 ntBASIC11.34□□□□□ -0.59
CD28P10747 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC11.34□□□□□ -0.59
CD28P10747 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
CD28P10747 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
CD28P10747 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
CD28P10747 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
CD28P10747 USP3-204ENST00000540797 5474 ntTSL 2 BASIC11.34□□□□□ -0.59
CD28P10747 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC11.34□□□□□ -0.59
CD28P10747 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC11.34□□□□□ -0.59
CD28P10747 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC11.34□□□□□ -0.59
CD28P10747 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.34□□□□□ -0.59
CD28P10747 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
CD28P10747 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 AC009093.10-201ENST00000641956 1442 ntBASIC11.34□□□□□ -0.59
CD28P10747 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
CD28P10747 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CD28P10747 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
CD28P10747 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC11.33□□□□□ -0.59
CD28P10747 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
CD28P10747 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC11.33□□□□□ -0.59
CD28P10747 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
CD28P10747 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC11.33□□□□□ -0.6
CD28P10747 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC11.33□□□□□ -0.6
CD28P10747 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
CD28P10747 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
CD28P10747 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
CD28P10747 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
CD28P10747 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CD28P10747 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC11.33□□□□□ -0.6
CD28P10747 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms