Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC20.6■□□□□ 0.89
CHGAP10645 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
CHGAP10645 MIR600HG-201ENST00000449175 5984 ntBASIC20.6■□□□□ 0.89
CHGAP10645 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CHGAP10645 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHGAP10645 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHGAP10645 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHGAP10645 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CHGAP10645 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC20.6■□□□□ 0.89
CHGAP10645 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHGAP10645 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC20.59■□□□□ 0.89
CHGAP10645 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC20.59■□□□□ 0.89
CHGAP10645 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHGAP10645 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHGAP10645 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHGAP10645 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
CHGAP10645 AC006486.2-201ENST00000624246 2199 ntBASIC20.59■□□□□ 0.89
CHGAP10645 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHGAP10645 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CHGAP10645 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHGAP10645 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHGAP10645 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHGAP10645 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHGAP10645 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHGAP10645 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC20.59■□□□□ 0.89
CHGAP10645 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHGAP10645 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC20.59■□□□□ 0.89
CHGAP10645 AC093826.1-201ENST00000508655 993 ntBASIC20.59■□□□□ 0.89
CHGAP10645 FAM86B3P-203ENST00000523992 854 ntBASIC20.59■□□□□ 0.89
CHGAP10645 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC20.59■□□□□ 0.89
CHGAP10645 THY1-209ENST00000580275 578 ntTSL 3 BASIC20.59■□□□□ 0.89
CHGAP10645 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC20.59■□□□□ 0.89
CHGAP10645 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC20.59■□□□□ 0.89
CHGAP10645 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHGAP10645 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHGAP10645 MECR-202ENST00000373791 2416 ntTSL 2 BASIC20.59■□□□□ 0.89
CHGAP10645 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHGAP10645 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC20.59■□□□□ 0.89
CHGAP10645 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHGAP10645 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CHGAP10645 MYADML-201ENST00000474610 2147 ntBASIC20.59■□□□□ 0.89
CHGAP10645 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
CHGAP10645 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHGAP10645 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHGAP10645 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHGAP10645 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHGAP10645 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHGAP10645 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHGAP10645 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHGAP10645 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC20.58■□□□□ 0.89
CHGAP10645 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHGAP10645 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHGAP10645 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC20.58■□□□□ 0.89
CHGAP10645 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHGAP10645 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHGAP10645 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHGAP10645 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC20.58■□□□□ 0.89
CHGAP10645 AL354702.1-201ENST00000442006 1960 ntBASIC20.58■□□□□ 0.89
CHGAP10645 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
CHGAP10645 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHGAP10645 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CHGAP10645 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CHGAP10645 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CHGAP10645 ACTG1P19-201ENST00000418987 1116 ntBASIC20.58■□□□□ 0.89
CHGAP10645 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC20.58■□□□□ 0.89
CHGAP10645 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC20.58■□□□□ 0.89
CHGAP10645 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC20.58■□□□□ 0.89
CHGAP10645 RN7SL494P-201ENST00000461517 304 ntBASIC20.58■□□□□ 0.89
CHGAP10645 RN7SL375P-201ENST00000492442 298 ntBASIC20.58■□□□□ 0.89
CHGAP10645 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC20.58■□□□□ 0.89
CHGAP10645 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC20.58■□□□□ 0.89
CHGAP10645 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC20.58■□□□□ 0.89
CHGAP10645 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CHGAP10645 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC20.58■□□□□ 0.89
CHGAP10645 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHGAP10645 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHGAP10645 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CHGAP10645 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHGAP10645 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHGAP10645 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC20.58■□□□□ 0.88
CHGAP10645 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHGAP10645 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHGAP10645 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC20.58■□□□□ 0.88
CHGAP10645 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHGAP10645 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHGAP10645 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHGAP10645 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC20.58■□□□□ 0.88
CHGAP10645 MYO15B-237ENST00000642007 4893 ntBASIC20.58■□□□□ 0.88
CHGAP10645 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHGAP10645 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC20.57■□□□□ 0.88
CHGAP10645 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHGAP10645 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC20.57■□□□□ 0.88
CHGAP10645 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHGAP10645 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHGAP10645 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHGAP10645 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHGAP10645 RNVU1-8-201ENST00000364272 125 ntBASIC20.57■□□□□ 0.88
CHGAP10645 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CHGAP10645 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHGAP10645 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms