Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
CTSBP07858 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.6□□□□□ -0.23
CTSBP07858 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.6□□□□□ -0.23
CTSBP07858 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.6□□□□□ -0.23
CTSBP07858 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.6□□□□□ -0.23
CTSBP07858 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CTSBP07858 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CTSBP07858 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC13.6□□□□□ -0.23
CTSBP07858 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.6□□□□□ -0.23
CTSBP07858 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC13.6□□□□□ -0.23
CTSBP07858 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
CTSBP07858 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CTSBP07858 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 KRT8P1-201ENST00000557533 1207 ntBASIC13.6□□□□□ -0.23
CTSBP07858 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.6□□□□□ -0.23
CTSBP07858 WDR7-208ENST00000589935 544 ntTSL 4 BASIC13.6□□□□□ -0.23
CTSBP07858 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.6□□□□□ -0.23
CTSBP07858 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC13.6□□□□□ -0.23
CTSBP07858 AC007326.1-201ENST00000604539 458 ntBASIC13.6□□□□□ -0.23
CTSBP07858 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC13.6□□□□□ -0.23
CTSBP07858 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.6□□□□□ -0.23
CTSBP07858 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.6□□□□□ -0.23
CTSBP07858 CMC2-224ENST00000630396 481 ntTSL 5 BASIC13.6□□□□□ -0.23
CTSBP07858 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CTSBP07858 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CTSBP07858 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.6□□□□□ -0.23
CTSBP07858 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CTSBP07858 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.6□□□□□ -0.23
CTSBP07858 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CTSBP07858 AC020910.6-201ENST00000623084 1459 ntBASIC13.6□□□□□ -0.23
CTSBP07858 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.6□□□□□ -0.23
CTSBP07858 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CTSBP07858 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CTSBP07858 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSBP07858 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSBP07858 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CTSBP07858 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSBP07858 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSBP07858 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
CTSBP07858 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CTSBP07858 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
CTSBP07858 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSBP07858 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSBP07858 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSBP07858 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSBP07858 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSBP07858 AC026748.1-201ENST00000624349 3251 ntBASIC13.59□□□□□ -0.23
CTSBP07858 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CTSBP07858 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.59□□□□□ -0.23
CTSBP07858 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CTSBP07858 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSBP07858 MIR33B-201ENST00000385104 96 ntBASIC13.59□□□□□ -0.23
CTSBP07858 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CTSBP07858 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSBP07858 AC073869.2-201ENST00000417338 1026 ntBASIC13.59□□□□□ -0.23
CTSBP07858 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CTSBP07858 DUTP3-201ENST00000450025 415 ntBASIC13.59□□□□□ -0.23
CTSBP07858 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CTSBP07858 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.59□□□□□ -0.23
CTSBP07858 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC13.59□□□□□ -0.23
CTSBP07858 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC13.59□□□□□ -0.23
CTSBP07858 AC019193.1-201ENST00000506678 823 ntBASIC13.59□□□□□ -0.23
CTSBP07858 FOS-204ENST00000554617 796 ntTSL 2 BASIC13.59□□□□□ -0.23
CTSBP07858 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.59□□□□□ -0.23
CTSBP07858 MIR4706-201ENST00000582134 82 ntBASIC13.59□□□□□ -0.23
CTSBP07858 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.59□□□□□ -0.23
CTSBP07858 AC138894.2-201ENST00000602838 371 ntBASIC13.59□□□□□ -0.23
CTSBP07858 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC13.59□□□□□ -0.23
CTSBP07858 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSBP07858 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSBP07858 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSBP07858 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CTSBP07858 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CTSBP07858 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.59□□□□□ -0.23
CTSBP07858 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms