Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HCN1O60741 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCN1O60741 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.62□□□□□ -0.23
HCN1O60741 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCN1O60741 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCN1O60741 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCN1O60741 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.62□□□□□ -0.23
HCN1O60741 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HCN1O60741 AGGF1P1-201ENST00000509500 2073 ntBASIC13.62□□□□□ -0.23
HCN1O60741 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.62□□□□□ -0.23
HCN1O60741 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCN1O60741 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCN1O60741 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
HCN1O60741 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.62□□□□□ -0.23
HCN1O60741 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HCN1O60741 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCN1O60741 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
HCN1O60741 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCN1O60741 AC006033.1-201ENST00000440505 426 ntBASIC13.62□□□□□ -0.23
HCN1O60741 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.62□□□□□ -0.23
HCN1O60741 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.62□□□□□ -0.23
HCN1O60741 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.62□□□□□ -0.23
HCN1O60741 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HCN1O60741 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
HCN1O60741 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
HCN1O60741 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.62□□□□□ -0.23
HCN1O60741 AC106820.3-201ENST00000561653 397 ntBASIC13.62□□□□□ -0.23
HCN1O60741 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.62□□□□□ -0.23
HCN1O60741 AC103810.3-201ENST00000583567 96 ntBASIC13.62□□□□□ -0.23
HCN1O60741 AC243960.2-201ENST00000600996 747 ntBASIC13.62□□□□□ -0.23
HCN1O60741 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.62□□□□□ -0.23
HCN1O60741 OR10B1P-201ENST00000601666 907 ntBASIC13.62□□□□□ -0.23
HCN1O60741 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.62□□□□□ -0.23
HCN1O60741 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.62□□□□□ -0.23
HCN1O60741 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.62□□□□□ -0.23
HCN1O60741 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HCN1O60741 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCN1O60741 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCN1O60741 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.62□□□□□ -0.23
HCN1O60741 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
HCN1O60741 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.62□□□□□ -0.23
HCN1O60741 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCN1O60741 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
HCN1O60741 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HCN1O60741 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCN1O60741 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCN1O60741 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCN1O60741 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCN1O60741 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HCN1O60741 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
HCN1O60741 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCN1O60741 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.62□□□□□ -0.23
HCN1O60741 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.62□□□□□ -0.23
HCN1O60741 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.62□□□□□ -0.23
HCN1O60741 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HCN1O60741 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HCN1O60741 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCN1O60741 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HCN1O60741 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCN1O60741 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.61□□□□□ -0.23
HCN1O60741 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCN1O60741 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HCN1O60741 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HCN1O60741 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HCN1O60741 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCN1O60741 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
HCN1O60741 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCN1O60741 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HCN1O60741 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCN1O60741 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HCN1O60741 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCN1O60741 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HCN1O60741 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCN1O60741 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.61□□□□□ -0.23
HCN1O60741 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HCN1O60741 AL136309.1-201ENST00000403917 691 ntBASIC13.61□□□□□ -0.23
HCN1O60741 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.61□□□□□ -0.23
HCN1O60741 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.61□□□□□ -0.23
HCN1O60741 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCN1O60741 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HCN1O60741 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCN1O60741 RPSAP36-202ENST00000494591 1261 ntBASIC13.61□□□□□ -0.23
HCN1O60741 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.61□□□□□ -0.23
HCN1O60741 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.61□□□□□ -0.23
HCN1O60741 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.61□□□□□ -0.23
HCN1O60741 PPY2P-201ENST00000582808 702 ntBASIC13.61□□□□□ -0.23
HCN1O60741 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HCN1O60741 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.61□□□□□ -0.23
HCN1O60741 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HCN1O60741 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HCN1O60741 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.61□□□□□ -0.23
HCN1O60741 AL356585.2-201ENST00000625078 2396 ntBASIC13.61□□□□□ -0.23
HCN1O60741 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCN1O60741 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.61□□□□□ -0.23
HCN1O60741 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCN1O60741 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCN1O60741 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HCN1O60741 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCN1O60741 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HCN1O60741 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms