Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHD2O14647 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC19.27■□□□□ 0.68
CHD2O14647 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CHD2O14647 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHD2O14647 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CHD2O14647 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC19.27■□□□□ 0.67
CHD2O14647 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.67
CHD2O14647 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD2O14647 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CHD2O14647 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CHD2O14647 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.26■□□□□ 0.67
CHD2O14647 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD2O14647 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CHD2O14647 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD2O14647 SDCBP2P1-201ENST00000416115 614 ntBASIC19.26■□□□□ 0.67
CHD2O14647 AL161727.1-201ENST00000457409 530 ntBASIC19.26■□□□□ 0.67
CHD2O14647 TPST2P1-201ENST00000564073 1102 ntBASIC19.26■□□□□ 0.67
CHD2O14647 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC19.26■□□□□ 0.67
CHD2O14647 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC19.26■□□□□ 0.67
CHD2O14647 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC19.26■□□□□ 0.67
CHD2O14647 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC19.26■□□□□ 0.67
CHD2O14647 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD2O14647 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHD2O14647 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CHD2O14647 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHD2O14647 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CHD2O14647 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CHD2O14647 AL513477.1-201ENST00000602865 2407 ntBASIC19.26■□□□□ 0.67
CHD2O14647 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD2O14647 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CHD2O14647 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHD2O14647 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC19.26■□□□□ 0.67
CHD2O14647 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CHD2O14647 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD2O14647 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHD2O14647 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
CHD2O14647 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD2O14647 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD2O14647 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD2O14647 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD2O14647 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD2O14647 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC19.25■□□□□ 0.67
CHD2O14647 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC19.25■□□□□ 0.67
CHD2O14647 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC19.25■□□□□ 0.67
CHD2O14647 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC19.25■□□□□ 0.67
CHD2O14647 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC19.25■□□□□ 0.67
CHD2O14647 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD2O14647 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD2O14647 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC19.25■□□□□ 0.67
CHD2O14647 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
CHD2O14647 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD2O14647 KRT8P38-201ENST00000441370 1430 ntBASIC19.25■□□□□ 0.67
CHD2O14647 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC19.25■□□□□ 0.67
CHD2O14647 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHD2O14647 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD2O14647 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD2O14647 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD2O14647 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD2O14647 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHD2O14647 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHD2O14647 AL121994.1-201ENST00000413189 402 ntBASIC19.25■□□□□ 0.67
CHD2O14647 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC19.25■□□□□ 0.67
CHD2O14647 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC19.25■□□□□ 0.67
CHD2O14647 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC19.25■□□□□ 0.67
CHD2O14647 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC19.25■□□□□ 0.67
CHD2O14647 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CHD2O14647 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CHD2O14647 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC19.25■□□□□ 0.67
CHD2O14647 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.25■□□□□ 0.67
CHD2O14647 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.25■□□□□ 0.67
CHD2O14647 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC19.25■□□□□ 0.67
CHD2O14647 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CHD2O14647 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC19.25■□□□□ 0.67
CHD2O14647 GUCY2EP-203ENST00000531117 1918 ntBASIC19.24■□□□□ 0.67
CHD2O14647 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHD2O14647 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CHD2O14647 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CHD2O14647 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD2O14647 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CHD2O14647 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD2O14647 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC19.24■□□□□ 0.67
CHD2O14647 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD2O14647 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CHD2O14647 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC19.24■□□□□ 0.67
CHD2O14647 WDR54-202ENST00000409791 854 ntTSL 3 BASIC19.24■□□□□ 0.67
CHD2O14647 CRIP1P2-201ENST00000425396 228 ntBASIC19.24■□□□□ 0.67
CHD2O14647 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
CHD2O14647 KRT8P25-201ENST00000473150 1456 ntBASIC19.24■□□□□ 0.67
CHD2O14647 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD2O14647 BOLA3P2-201ENST00000586496 323 ntBASIC19.24■□□□□ 0.67
CHD2O14647 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC19.24■□□□□ 0.67
CHD2O14647 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.24■□□□□ 0.67
CHD2O14647 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHD2O14647 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD2O14647 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CHD2O14647 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CHD2O14647 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD2O14647 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CHD2O14647 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.24■□□□□ 0.67
CHD2O14647 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 273.8 ms