Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AC068760.1-201ENST00000493579 1953 ntBASIC18.33■□□□□ 0.52
CHL1O00533 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHL1O00533 AC006372.4-201ENST00000624122 1543 ntBASIC18.33■□□□□ 0.52
CHL1O00533 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC18.33■□□□□ 0.52
CHL1O00533 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC18.33■□□□□ 0.52
CHL1O00533 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHL1O00533 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC18.32■□□□□ 0.52
CHL1O00533 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC18.32■□□□□ 0.52
CHL1O00533 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHL1O00533 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CHL1O00533 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHL1O00533 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHL1O00533 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.32■□□□□ 0.52
CHL1O00533 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHL1O00533 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHL1O00533 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHL1O00533 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHL1O00533 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHL1O00533 AP000356.3-201ENST00000382243 753 ntBASIC18.32■□□□□ 0.52
CHL1O00533 HLA-DMA-203ENST00000395305 777 ntBASIC18.32■□□□□ 0.52
CHL1O00533 AL512306.1-201ENST00000432698 848 ntBASIC18.32■□□□□ 0.52
CHL1O00533 AC018638.5-201ENST00000450885 754 ntBASIC18.32■□□□□ 0.52
CHL1O00533 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC18.32■□□□□ 0.52
CHL1O00533 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC18.32■□□□□ 0.52
CHL1O00533 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC18.32■□□□□ 0.52
CHL1O00533 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC18.32■□□□□ 0.52
CHL1O00533 MIR3147-201ENST00000577811 66 ntBASIC18.32■□□□□ 0.52
CHL1O00533 RPL17P45-201ENST00000586289 509 ntBASIC18.32■□□□□ 0.52
CHL1O00533 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC18.32■□□□□ 0.52
CHL1O00533 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC18.32■□□□□ 0.52
CHL1O00533 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC18.32■□□□□ 0.52
CHL1O00533 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHL1O00533 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC18.32■□□□□ 0.52
CHL1O00533 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHL1O00533 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.32■□□□□ 0.52
CHL1O00533 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHL1O00533 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHL1O00533 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC18.32■□□□□ 0.52
CHL1O00533 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHL1O00533 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CHL1O00533 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHL1O00533 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHL1O00533 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CHL1O00533 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHL1O00533 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHL1O00533 KRT8P18-201ENST00000413425 1445 ntBASIC18.32■□□□□ 0.52
CHL1O00533 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC18.31■□□□□ 0.52
CHL1O00533 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC18.31■□□□□ 0.52
CHL1O00533 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHL1O00533 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHL1O00533 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC18.31■□□□□ 0.52
CHL1O00533 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CHL1O00533 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC18.31■□□□□ 0.52
CHL1O00533 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC18.31■□□□□ 0.52
CHL1O00533 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHL1O00533 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC18.31■□□□□ 0.52
CHL1O00533 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHL1O00533 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHL1O00533 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC18.31■□□□□ 0.52
CHL1O00533 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHL1O00533 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHL1O00533 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHL1O00533 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHL1O00533 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHL1O00533 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC18.31■□□□□ 0.52
CHL1O00533 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHL1O00533 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CHL1O00533 AC098934.1-203ENST00000442868 1262 ntBASIC18.31■□□□□ 0.52
CHL1O00533 SLC25A15P3-201ENST00000505530 290 ntBASIC18.31■□□□□ 0.52
CHL1O00533 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHL1O00533 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHL1O00533 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHL1O00533 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC18.31■□□□□ 0.52
CHL1O00533 MT3-203ENST00000565838 421 ntTSL 3 BASIC18.31■□□□□ 0.52
CHL1O00533 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC18.31■□□□□ 0.52
CHL1O00533 MIR4722-201ENST00000578292 60 ntBASIC18.31■□□□□ 0.52
CHL1O00533 AC087045.2-201ENST00000606279 1003 ntBASIC18.31■□□□□ 0.52
CHL1O00533 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHL1O00533 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC18.31■□□□□ 0.52
CHL1O00533 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHL1O00533 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
CHL1O00533 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CHL1O00533 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHL1O00533 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHL1O00533 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHL1O00533 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CHL1O00533 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHL1O00533 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHL1O00533 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHL1O00533 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CHL1O00533 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHL1O00533 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC18.31■□□□□ 0.52
CHL1O00533 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHL1O00533 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHL1O00533 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CHL1O00533 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHL1O00533 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHL1O00533 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHL1O00533 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CHL1O00533 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms