Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC21.74■■□□□ 1.07
RIMBP3Q9UFD9 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
RIMBP3Q9UFD9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 TPI1P3-201ENST00000335020 740 ntBASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 SYNGR4-201ENST00000344846 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 BX284656.1-201ENST00000446364 668 ntTSL 3 BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 AL031773.1-201ENST00000453579 554 ntTSL 3 BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 AC097658.2-201ENST00000512715 624 ntTSL 3 BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 ADIPOR1P2-201ENST00000554199 820 ntBASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 RN7SL750P-201ENST00000582814 238 ntBASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 AL589743.3-201ENST00000604121 517 ntBASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 FKBP4P1-201ENST00000507284 1347 ntBASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 FAM96A-201ENST00000300030 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 GSTA4-201ENST00000370959 793 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 FAM138A-201ENST00000417324 1187 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 PRAMEF35P-201ENST00000458709 891 ntBASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 FAM138D-201ENST00000504074 1187 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 FAM138E-201ENST00000507796 1187 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 HNRNPA1P4-201ENST00000509706 756 ntBASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 BBOX1-AS1-203ENST00000530430 879 ntTSL 4 BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 BBOX1-AS1-204ENST00000531363 745 ntTSL 2 BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 AC015802.4-203ENST00000592622 570 ntTSL 4 BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 AC009061.2-204ENST00000602476 524 ntTSL 3 BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 Metazoa_SRP.97-201ENST00000618280 304 ntBASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RIMBP3Q9UFD9 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
RIMBP3Q9UFD9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RIMBP3Q9UFD9 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RIMBP3Q9UFD9 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RIMBP3Q9UFD9 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RIMBP3Q9UFD9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RIMBP3Q9UFD9 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RIMBP3Q9UFD9 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC21.72■■□□□ 1.07
RIMBP3Q9UFD9 MUTYH-236ENST00000529984 1029 ntTSL 2 BASIC21.72■■□□□ 1.07
RIMBP3Q9UFD9 AC080038.2-201ENST00000617734 423 ntBASIC21.72■■□□□ 1.07
RIMBP3Q9UFD9 RPS9-213ENST00000626547 476 ntTSL 2 BASIC21.72■■□□□ 1.07
RIMBP3Q9UFD9 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RIMBP3Q9UFD9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RIMBP3Q9UFD9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.72■■□□□ 1.07
RIMBP3Q9UFD9 OS9-207ENST00000439210 1946 ntTSL 2 BASIC21.72■■□□□ 1.07
RIMBP3Q9UFD9 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC21.72■■□□□ 1.07
RIMBP3Q9UFD9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RIMBP3Q9UFD9 AC106820.2-201ENST00000563775 3264 ntBASIC21.72■■□□□ 1.07
RIMBP3Q9UFD9 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RIMBP3Q9UFD9 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
RIMBP3Q9UFD9 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
RIMBP3Q9UFD9 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
RIMBP3Q9UFD9 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RIMBP3Q9UFD9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RIMBP3Q9UFD9 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RIMBP3Q9UFD9 AC244197.2-201ENST00000370438 655 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RIMBP3Q9UFD9 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC21.71■■□□□ 1.07
RIMBP3Q9UFD9 IFNWP19-201ENST00000438727 566 ntBASIC21.71■■□□□ 1.07
RIMBP3Q9UFD9 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC21.71■■□□□ 1.07
RIMBP3Q9UFD9 AC015688.5-201ENST00000584605 603 ntAPPRIS P5 TSL 2 BASIC21.71■■□□□ 1.07
RIMBP3Q9UFD9 SIRPG-205ENST00000381583 1383 ntTSL 5 BASIC21.71■■□□□ 1.07
RIMBP3Q9UFD9 SLC25A19-204ENST00000416858 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RIMBP3Q9UFD9 AC093462.1-201ENST00000621167 1683 ntBASIC21.71■■□□□ 1.07
RIMBP3Q9UFD9 MAFTRR-201ENST00000562921 1859 ntTSL 5 BASIC21.71■■□□□ 1.07
RIMBP3Q9UFD9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RIMBP3Q9UFD9 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC21.71■■□□□ 1.07
RIMBP3Q9UFD9 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RIMBP3Q9UFD9 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC21.71■■□□□ 1.07
RIMBP3Q9UFD9 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
RIMBP3Q9UFD9 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
RIMBP3Q9UFD9 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC21.71■■□□□ 1.07
RIMBP3Q9UFD9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RIMBP3Q9UFD9 BID-213ENST00000615414 2236 ntTSL 5 BASIC21.7■■□□□ 1.06
RIMBP3Q9UFD9 THYN1-202ENST00000352327 835 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RIMBP3Q9UFD9 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
RIMBP3Q9UFD9 AP001341.1-201ENST00000409758 763 ntTSL 3 BASIC21.7■■□□□ 1.06
RIMBP3Q9UFD9 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC21.7■■□□□ 1.06
RIMBP3Q9UFD9 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC21.7■■□□□ 1.06
RIMBP3Q9UFD9 MT1G-204ENST00000569500 305 ntTSL 3 BASIC21.7■■□□□ 1.06
RIMBP3Q9UFD9 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC21.7■■□□□ 1.06
RIMBP3Q9UFD9 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RIMBP3Q9UFD9 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RIMBP3Q9UFD9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RIMBP3Q9UFD9 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RIMBP3Q9UFD9 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC21.7■■□□□ 1.06
RIMBP3Q9UFD9 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RIMBP3Q9UFD9 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RIMBP3Q9UFD9 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RIMBP3Q9UFD9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RIMBP3Q9UFD9 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC21.7■■□□□ 1.06
RIMBP3Q9UFD9 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC21.7■■□□□ 1.06
RIMBP3Q9UFD9 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RIMBP3Q9UFD9 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms