Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 BX284668.4-201ENST00000453917 508 ntBASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 RN7SL769P-201ENST00000469386 295 ntBASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 AC105129.2-201ENST00000559536 390 ntBASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 AC126335.2-201ENST00000623362 4637 ntBASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 AC027601.5-201ENST00000624065 2482 ntBASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 LDHBP1-201ENST00000455730 1119 ntBASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 TMEM198B-204ENST00000484016 896 ntBASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 AC021723.1-201ENST00000486306 515 ntBASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 ACTG1P17-201ENST00000558391 1119 ntBASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 AL390728.6-201ENST00000566446 1246 ntBASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 MIR6074-201ENST00000612054 107 ntBASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.06□□□□□ -0.16
CUEDC1Q9NWM3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms