Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 AC007551.1-201ENST00000457394 519 ntBASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 AC027601.3-201ENST00000622907 509 ntBASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NEUROD4Q9HD90 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 AC006001.1-201ENST00000325130 474 ntBASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 CICP12-201ENST00000455801 843 ntBASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 MIR4683-201ENST00000579659 81 ntBASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 AC060766.1-201ENST00000590824 627 ntBASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 AL358472.3-201ENST00000608147 415 ntBASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
NEUROD4Q9HD90 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms