Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 MESTP3-201ENST00000503460 968 ntBASIC14.13□□□□□ -0.15
EBF4Q9BQW3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 AC027237.1-201ENST00000560942 655 ntBASIC14.13□□□□□ -0.15
EBF4Q9BQW3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 AC093028.1-201ENST00000622998 982 ntBASIC14.13□□□□□ -0.15
EBF4Q9BQW3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
EBF4Q9BQW3 MKRN5P-201ENST00000445263 1467 ntBASIC14.12□□□□□ -0.15
EBF4Q9BQW3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 AL359845.1-201ENST00000458202 1648 ntBASIC14.12□□□□□ -0.15
EBF4Q9BQW3 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 AL355102.3-201ENST00000554299 1678 ntBASIC14.12□□□□□ -0.15
EBF4Q9BQW3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 AL391647.1-201ENST00000395664 511 ntBASIC14.12□□□□□ -0.15
EBF4Q9BQW3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 SOCS2P1-201ENST00000417727 557 ntBASIC14.12□□□□□ -0.15
EBF4Q9BQW3 ARSEP1-201ENST00000420443 635 ntBASIC14.12□□□□□ -0.15
EBF4Q9BQW3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 GNAQP1-201ENST00000444815 1067 ntBASIC14.12□□□□□ -0.15
EBF4Q9BQW3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 AL391280.1-201ENST00000506969 1062 ntBASIC14.12□□□□□ -0.15
EBF4Q9BQW3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC14.12□□□□□ -0.15
EBF4Q9BQW3 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.12□□□□□ -0.15
EBF4Q9BQW3 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
EBF4Q9BQW3 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.11□□□□□ -0.15
EBF4Q9BQW3 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
EBF4Q9BQW3 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
EBF4Q9BQW3 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.11□□□□□ -0.15
EBF4Q9BQW3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
EBF4Q9BQW3 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
EBF4Q9BQW3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
EBF4Q9BQW3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
EBF4Q9BQW3 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms