Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 NOC2LP1-201ENST00000450578 752 ntBASIC16.81■□□□□ 0.28
SLF1Q9BQI6 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 AC005840.4-201ENST00000541242 2494 ntBASIC16.81■□□□□ 0.28
SLF1Q9BQI6 AC018529.2-202ENST00000611482 3087 ntBASIC16.81■□□□□ 0.28
SLF1Q9BQI6 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLF1Q9BQI6 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 BANF1P3-201ENST00000412556 261 ntBASIC16.8■□□□□ 0.28
SLF1Q9BQI6 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 AC103810.10-201ENST00000606504 343 ntBASIC16.8■□□□□ 0.28
SLF1Q9BQI6 AC018635.2-201ENST00000608625 364 ntBASIC16.8■□□□□ 0.28
SLF1Q9BQI6 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLF1Q9BQI6 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 KRT18P9-201ENST00000604826 1300 ntBASIC16.79■□□□□ 0.28
SLF1Q9BQI6 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 MIR3147-201ENST00000577811 66 ntBASIC16.79■□□□□ 0.28
SLF1Q9BQI6 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 AL022334.2-201ENST00000610000 484 ntBASIC16.79■□□□□ 0.28
SLF1Q9BQI6 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms