Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ARID3AQ99856 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC16.65■□□□□ 0.26
ARID3AQ99856 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ARID3AQ99856 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ARID3AQ99856 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
ARID3AQ99856 SLC7A15P-201ENST00000424028 1363 ntBASIC16.64■□□□□ 0.26
ARID3AQ99856 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
ARID3AQ99856 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARID3AQ99856 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ARID3AQ99856 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
ARID3AQ99856 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC16.64■□□□□ 0.25
ARID3AQ99856 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ARID3AQ99856 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC16.64■□□□□ 0.25
ARID3AQ99856 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ARID3AQ99856 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC16.64■□□□□ 0.25
ARID3AQ99856 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ARID3AQ99856 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
ARID3AQ99856 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ARID3AQ99856 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARID3AQ99856 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARID3AQ99856 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.64■□□□□ 0.25
ARID3AQ99856 AC098850.1-201ENST00000419919 790 ntBASIC16.64■□□□□ 0.25
ARID3AQ99856 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.64■□□□□ 0.25
ARID3AQ99856 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.64■□□□□ 0.25
ARID3AQ99856 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.64■□□□□ 0.25
ARID3AQ99856 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.64■□□□□ 0.25
ARID3AQ99856 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
ARID3AQ99856 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARID3AQ99856 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARID3AQ99856 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.64■□□□□ 0.25
ARID3AQ99856 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.64■□□□□ 0.25
ARID3AQ99856 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARID3AQ99856 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
ARID3AQ99856 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ARID3AQ99856 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARID3AQ99856 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARID3AQ99856 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARID3AQ99856 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC16.64■□□□□ 0.25
ARID3AQ99856 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.64■□□□□ 0.25
ARID3AQ99856 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.64■□□□□ 0.25
ARID3AQ99856 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC16.64■□□□□ 0.25
ARID3AQ99856 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARID3AQ99856 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARID3AQ99856 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ARID3AQ99856 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARID3AQ99856 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ARID3AQ99856 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.63■□□□□ 0.25
ARID3AQ99856 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC16.63■□□□□ 0.25
ARID3AQ99856 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
ARID3AQ99856 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC16.63■□□□□ 0.25
ARID3AQ99856 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ARID3AQ99856 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARID3AQ99856 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ARID3AQ99856 AC114271.1-201ENST00000612689 2813 ntBASIC16.63■□□□□ 0.25
ARID3AQ99856 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
ARID3AQ99856 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ARID3AQ99856 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARID3AQ99856 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ARID3AQ99856 AC007541.1-201ENST00000570282 1469 ntBASIC16.63■□□□□ 0.25
ARID3AQ99856 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
ARID3AQ99856 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARID3AQ99856 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARID3AQ99856 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARID3AQ99856 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.63■□□□□ 0.25
ARID3AQ99856 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARID3AQ99856 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.63■□□□□ 0.25
ARID3AQ99856 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARID3AQ99856 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.63■□□□□ 0.25
ARID3AQ99856 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.63■□□□□ 0.25
ARID3AQ99856 RN7SL399P-201ENST00000471648 279 ntBASIC16.63■□□□□ 0.25
ARID3AQ99856 FAM86LP-201ENST00000478302 853 ntBASIC16.63■□□□□ 0.25
ARID3AQ99856 TERF1P3-201ENST00000505638 1227 ntBASIC16.63■□□□□ 0.25
ARID3AQ99856 AC093004.1-201ENST00000508850 424 ntBASIC16.63■□□□□ 0.25
ARID3AQ99856 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.63■□□□□ 0.25
ARID3AQ99856 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.63■□□□□ 0.25
ARID3AQ99856 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.63■□□□□ 0.25
ARID3AQ99856 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARID3AQ99856 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ARID3AQ99856 AC036164.1-201ENST00000570544 333 ntBASIC16.63■□□□□ 0.25
ARID3AQ99856 CHCHD2P3-201ENST00000603038 451 ntBASIC16.63■□□□□ 0.25
ARID3AQ99856 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.63■□□□□ 0.25
ARID3AQ99856 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ARID3AQ99856 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.63■□□□□ 0.25
ARID3AQ99856 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ARID3AQ99856 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ARID3AQ99856 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.63■□□□□ 0.25
ARID3AQ99856 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC16.63■□□□□ 0.25
ARID3AQ99856 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ARID3AQ99856 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC16.63■□□□□ 0.25
ARID3AQ99856 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC16.63■□□□□ 0.25
ARID3AQ99856 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ARID3AQ99856 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ARID3AQ99856 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC16.63■□□□□ 0.25
ARID3AQ99856 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARID3AQ99856 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARID3AQ99856 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARID3AQ99856 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ARID3AQ99856 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ARID3AQ99856 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARID3AQ99856 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms