Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TMEM54Q969K7 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TMEM54Q969K7 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TMEM54Q969K7 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
TMEM54Q969K7 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
TMEM54Q969K7 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.71□□□□□ -0.38
TMEM54Q969K7 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
TMEM54Q969K7 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.7□□□□□ -0.38
TMEM54Q969K7 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
TMEM54Q969K7 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM54Q969K7 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.7□□□□□ -0.38
TMEM54Q969K7 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM54Q969K7 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM54Q969K7 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM54Q969K7 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM54Q969K7 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM54Q969K7 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.7□□□□□ -0.38
TMEM54Q969K7 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM54Q969K7 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM54Q969K7 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM54Q969K7 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.7□□□□□ -0.38
TMEM54Q969K7 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM54Q969K7 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM54Q969K7 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM54Q969K7 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.7□□□□□ -0.38
TMEM54Q969K7 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.7□□□□□ -0.38
TMEM54Q969K7 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.7□□□□□ -0.38
TMEM54Q969K7 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
TMEM54Q969K7 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.7□□□□□ -0.38
TMEM54Q969K7 AC013355.1-201ENST00000562625 723 ntBASIC12.7□□□□□ -0.38
TMEM54Q969K7 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.7□□□□□ -0.38
TMEM54Q969K7 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.7□□□□□ -0.38
TMEM54Q969K7 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.7□□□□□ -0.38
TMEM54Q969K7 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
TMEM54Q969K7 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
TMEM54Q969K7 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.7□□□□□ -0.38
TMEM54Q969K7 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM54Q969K7 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.7□□□□□ -0.38
TMEM54Q969K7 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
TMEM54Q969K7 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM54Q969K7 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.7□□□□□ -0.38
TMEM54Q969K7 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TMEM54Q969K7 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM54Q969K7 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM54Q969K7 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM54Q969K7 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
TMEM54Q969K7 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.7□□□□□ -0.38
TMEM54Q969K7 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.7□□□□□ -0.38
TMEM54Q969K7 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM54Q969K7 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.7□□□□□ -0.38
TMEM54Q969K7 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM54Q969K7 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM54Q969K7 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM54Q969K7 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM54Q969K7 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM54Q969K7 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM54Q969K7 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM54Q969K7 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM54Q969K7 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 GRN-222ENST00000639447 1314 ntTSL 2 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.69□□□□□ -0.38
TMEM54Q969K7 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 AC103592.1-201ENST00000394513 664 ntBASIC12.69□□□□□ -0.38
TMEM54Q969K7 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 ACTBP11-201ENST00000436287 1126 ntBASIC12.69□□□□□ -0.38
TMEM54Q969K7 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM54Q969K7 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.69□□□□□ -0.38
TMEM54Q969K7 AC108725.1-201ENST00000495472 409 ntBASIC12.69□□□□□ -0.38
TMEM54Q969K7 MARK2P5-201ENST00000507649 634 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms