Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP6V0A1Q93050 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP6V0A1Q93050 AP003419.4-201ENST00000616071 517 ntBASIC16.16■□□□□ 0.18
ATP6V0A1Q93050 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.16■□□□□ 0.18
ATP6V0A1Q93050 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP6V0A1Q93050 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ATP6V0A1Q93050 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATP6V0A1Q93050 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP6V0A1Q93050 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP6V0A1Q93050 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ATP6V0A1Q93050 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATP6V0A1Q93050 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP6V0A1Q93050 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP6V0A1Q93050 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP6V0A1Q93050 AC074138.1-201ENST00000611182 1303 ntBASIC16.16■□□□□ 0.18
ATP6V0A1Q93050 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.16■□□□□ 0.18
ATP6V0A1Q93050 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP6V0A1Q93050 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ATP6V0A1Q93050 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.16■□□□□ 0.18
ATP6V0A1Q93050 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 AC090505.1-201ENST00000430515 1834 ntBASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 RNA5SP359-201ENST00000364838 113 ntBASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 AP000356.3-201ENST00000382243 753 ntBASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 AL583805.1-201ENST00000391389 531 ntBASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 AC078991.1-201ENST00000437297 610 ntBASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 AC015802.1-201ENST00000588104 1449 ntBASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 AC092171.5-201ENST00000608012 942 ntBASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 AP001267.2-201ENST00000532619 2086 ntBASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 AC232323.1-201ENST00000540724 2099 ntBASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 KRT18P9-201ENST00000604826 1300 ntBASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6V0A1Q93050 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.18
ATP6V0A1Q93050 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.14■□□□□ 0.18
ATP6V0A1Q93050 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.14■□□□□ 0.18
ATP6V0A1Q93050 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ATP6V0A1Q93050 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6V0A1Q93050 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6V0A1Q93050 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6V0A1Q93050 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6V0A1Q93050 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ATP6V0A1Q93050 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.14■□□□□ 0.17
ATP6V0A1Q93050 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6V0A1Q93050 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6V0A1Q93050 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ATP6V0A1Q93050 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6V0A1Q93050 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ATP6V0A1Q93050 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6V0A1Q93050 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.14■□□□□ 0.17
ATP6V0A1Q93050 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
ATP6V0A1Q93050 BANF1P3-201ENST00000412556 261 ntBASIC16.14■□□□□ 0.17
ATP6V0A1Q93050 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6V0A1Q93050 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms