Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 AC107375.1-201ENST00000564464 2231 ntBASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 MSNP1-201ENST00000511640 1732 ntBASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CKAP2Q8WWK9 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 LINC01165-201ENST00000445190 1623 ntBASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 AGGF1P10-201ENST00000635005 2191 ntBASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CKAP2Q8WWK9 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 RPL13AP25-201ENST00000484130 612 ntBASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 RARRES2P5-201ENST00000564013 466 ntBASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 LRRC59-203ENST00000576448 1531 ntBASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CKAP2Q8WWK9 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms