Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 AC008825.2-201ENST00000603374 718 ntBASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 AL136301.1-201ENST00000615830 422 ntBASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 CICP16-201ENST00000502609 2813 ntBASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAF3IP1Q8TDR0 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 CICP12-201ENST00000455801 843 ntBASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 AC005586.2-201ENST00000563946 837 ntBASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 AL358472.3-201ENST00000608147 415 ntBASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 AC105233.6-201ENST00000642093 218 ntBASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAF3IP1Q8TDR0 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms