Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CFAP61Q8NHU2 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.8□□□□□ -0.04
CFAP61Q8NHU2 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CFAP61Q8NHU2 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 GAPDHP21-201ENST00000450301 1010 ntBASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 USP32P1-208ENST00000506594 1164 ntBASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 CR383656.12-201ENST00000549567 513 ntBASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 AC233724.13-201ENST00000598383 410 ntBASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 AL022328.1-201ENST00000610050 478 ntBASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.79□□□□□ -0.04
CFAP61Q8NHU2 BEND3P3-201ENST00000611030 2440 ntBASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 AC020658.7-201ENST00000624274 2442 ntBASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
CFAP61Q8NHU2 AC114271.1-201ENST00000612689 2813 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms