Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.08□□□□□ -0.32
BBS1Q8NFJ9 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BBS1Q8NFJ9 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
BBS1Q8NFJ9 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BBS1Q8NFJ9 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BBS1Q8NFJ9 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.08□□□□□ -0.32
BBS1Q8NFJ9 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.08□□□□□ -0.32
BBS1Q8NFJ9 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
BBS1Q8NFJ9 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
BBS1Q8NFJ9 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BBS1Q8NFJ9 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
BBS1Q8NFJ9 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
BBS1Q8NFJ9 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BBS1Q8NFJ9 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BBS1Q8NFJ9 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.08□□□□□ -0.32
BBS1Q8NFJ9 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.08□□□□□ -0.32
BBS1Q8NFJ9 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.08□□□□□ -0.32
BBS1Q8NFJ9 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.08□□□□□ -0.32
BBS1Q8NFJ9 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BBS1Q8NFJ9 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.08□□□□□ -0.32
BBS1Q8NFJ9 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.08□□□□□ -0.32
BBS1Q8NFJ9 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 MEX3B-202ENST00000558133 4333 ntBASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 AC139530.3-201ENST00000620344 690 ntBASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 AL591122.2-201ENST00000624125 1853 ntBASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 AC083964.2-201ENST00000623988 2396 ntBASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
BBS1Q8NFJ9 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.06□□□□□ -0.32
BBS1Q8NFJ9 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BBS1Q8NFJ9 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BBS1Q8NFJ9 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
BBS1Q8NFJ9 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
BBS1Q8NFJ9 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
BBS1Q8NFJ9 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
BBS1Q8NFJ9 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
BBS1Q8NFJ9 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BBS1Q8NFJ9 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
BBS1Q8NFJ9 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
BBS1Q8NFJ9 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
BBS1Q8NFJ9 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
BBS1Q8NFJ9 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BBS1Q8NFJ9 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
BBS1Q8NFJ9 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
BBS1Q8NFJ9 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
BBS1Q8NFJ9 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BBS1Q8NFJ9 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BBS1Q8NFJ9 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
BBS1Q8NFJ9 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BBS1Q8NFJ9 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
BBS1Q8NFJ9 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BBS1Q8NFJ9 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
BBS1Q8NFJ9 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
BBS1Q8NFJ9 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
BBS1Q8NFJ9 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms