Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.3■□□□□ 0.04
TTC16Q8NEE8 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 AC022532.1-201ENST00000624563 1728 ntBASIC15.29■□□□□ 0.04
TTC16Q8NEE8 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 AC120057.1-201ENST00000483947 663 ntBASIC15.29■□□□□ 0.04
TTC16Q8NEE8 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 GCOM2-201ENST00000509133 1104 ntBASIC15.29■□□□□ 0.04
TTC16Q8NEE8 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 RN7SL371P-201ENST00000578099 267 ntBASIC15.29■□□□□ 0.04
TTC16Q8NEE8 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 AL133499.1-201ENST00000596207 608 ntBASIC15.29■□□□□ 0.04
TTC16Q8NEE8 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 AC012044.1-201ENST00000603431 297 ntBASIC15.29■□□□□ 0.04
TTC16Q8NEE8 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.29■□□□□ 0.04
TTC16Q8NEE8 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC16Q8NEE8 TCAF2P1-201ENST00000291129 2421 ntBASIC15.28■□□□□ 0.04
TTC16Q8NEE8 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 AC117489.1-201ENST00000625169 3217 ntBASIC15.28■□□□□ 0.04
TTC16Q8NEE8 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 AC007274.2-201ENST00000421675 662 ntBASIC15.28■□□□□ 0.04
TTC16Q8NEE8 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 VDAC1P1-201ENST00000439229 848 ntBASIC15.28■□□□□ 0.04
TTC16Q8NEE8 EEF1DP6-201ENST00000449232 372 ntBASIC15.28■□□□□ 0.04
TTC16Q8NEE8 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.28■□□□□ 0.04
TTC16Q8NEE8 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 RTN3P1-201ENST00000536295 711 ntBASIC15.28■□□□□ 0.04
TTC16Q8NEE8 AL353726.2-201ENST00000623259 884 ntBASIC15.28■□□□□ 0.04
TTC16Q8NEE8 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC16Q8NEE8 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms