Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 AL355994.2-201ENST00000447882 704 ntBASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 SHC1P1-201ENST00000425230 1745 ntBASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SIMC1Q8NDZ2 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 MIR326-201ENST00000362220 95 ntBASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 AC010141.1-201ENST00000411585 623 ntBASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.71□□□□□ -0.21
SIMC1Q8NDZ2 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SIMC1Q8NDZ2 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SIMC1Q8NDZ2 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SIMC1Q8NDZ2 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SIMC1Q8NDZ2 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SIMC1Q8NDZ2 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.71□□□□□ -0.22
SIMC1Q8NDZ2 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.22
SIMC1Q8NDZ2 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
SIMC1Q8NDZ2 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
SIMC1Q8NDZ2 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SIMC1Q8NDZ2 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
SIMC1Q8NDZ2 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.71□□□□□ -0.22
SIMC1Q8NDZ2 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.71□□□□□ -0.22
SIMC1Q8NDZ2 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SIMC1Q8NDZ2 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
SIMC1Q8NDZ2 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SIMC1Q8NDZ2 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 NUTM2HP-201ENST00000442076 2498 ntBASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SIMC1Q8NDZ2 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms