Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 AC073413.1-201ENST00000603927 732 ntBASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 AC138951.2-201ENST00000623455 1161 ntBASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 AC002472.3-201ENST00000640124 621 ntBASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 AC020910.6-201ENST00000623084 1459 ntBASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 AC012617.1-204ENST00000586340 2305 ntBASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 BEND3P1-201ENST00000421591 1944 ntBASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 SORD2P-201ENST00000558556 1069 ntBASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 MIR4683-201ENST00000579659 81 ntBASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 RN7SL713P-201ENST00000582127 302 ntBASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 AC105233.6-201ENST00000642093 218 ntBASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 AC016397.2-201ENST00000624848 1985 ntBASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 LINC01230-201ENST00000625222 3017 ntBASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
ZNF439Q8NDP4 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms