Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 FGFR3P5-201ENST00000564496 886 ntBASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 KRT8P19-201ENST00000551916 1455 ntBASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC33Q8N5R6 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 AL928921.2-201ENST00000641325 2442 ntBASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 RN7SKP175-201ENST00000408472 289 ntBASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 ACTG1P2-201ENST00000415776 1125 ntBASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 ACTG1P11-201ENST00000425411 1125 ntBASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 AC011742.3-201ENST00000439053 820 ntBASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 AL645939.5-201ENST00000606834 243 ntBASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 AL358472.3-201ENST00000608147 415 ntBASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 AC011498.7-201ENST00000624986 2027 ntBASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC33Q8N5R6 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 AC004899.1-201ENST00000424687 1714 ntBASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms