Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 LINC01230-201ENST00000625222 3017 ntBASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 HSPA8P5-201ENST00000456928 2069 ntBASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 MIR1909-201ENST00000411312 80 ntBASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 AC079178.1-201ENST00000420915 656 ntBASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 FAM58BP-201ENST00000439056 645 ntBASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 GPR53P-205ENST00000457298 1084 ntBASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 ACA64.2-201ENST00000459014 129 ntBASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 AP005482.1-201ENST00000563722 1273 ntBASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 AC132192.2-201ENST00000596206 1147 ntBASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 AC104506.1-201ENST00000609247 429 ntBASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 AC244157.2-201ENST00000616239 1006 ntBASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 AL359881.3-201ENST00000602640 1721 ntBASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TTC9CQ8N5M4 AC117489.1-201ENST00000625169 3217 ntBASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 AC010327.5-201ENST00000586923 3061 ntBASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 CSF2RBP1-201ENST00000447905 391 ntBASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 AC100850.1-201ENST00000506768 649 ntBASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC11.48□□□□□ -0.57
TTC9CQ8N5M4 HNRNPA1P48-202ENST00000565308 961 ntBASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms