Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS8Q8N3P4 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS8Q8N3P4 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
VPS8Q8N3P4 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 RN7SKP109-201ENST00000410592 316 ntBASIC22.15■■□□□ 1.14
VPS8Q8N3P4 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 CD81-209ENST00000492627 886 ntTSL 3 BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 IQSEC3P1-201ENST00000538799 536 ntBASIC22.15■■□□□ 1.14
VPS8Q8N3P4 DNM1P30-201ENST00000563586 452 ntBASIC22.15■■□□□ 1.14
VPS8Q8N3P4 MIR3147-201ENST00000577811 66 ntBASIC22.15■■□□□ 1.14
VPS8Q8N3P4 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 FTX-216ENST00000638985 1367 ntTSL 5 BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 AC093462.1-201ENST00000621167 1683 ntBASIC22.15■■□□□ 1.14
VPS8Q8N3P4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS8Q8N3P4 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
VPS8Q8N3P4 SAT1-201ENST00000379251 801 ntTSL 2 BASIC22.14■■□□□ 1.14
VPS8Q8N3P4 SAT1-202ENST00000379253 909 ntTSL 2 BASIC22.14■■□□□ 1.14
VPS8Q8N3P4 SAT1-203ENST00000379254 868 ntTSL 3 BASIC22.14■■□□□ 1.14
VPS8Q8N3P4 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
VPS8Q8N3P4 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC22.14■■□□□ 1.14
VPS8Q8N3P4 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC22.14■■□□□ 1.14
VPS8Q8N3P4 AC145285.5-201ENST00000562217 361 ntBASIC22.14■■□□□ 1.14
VPS8Q8N3P4 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.14
VPS8Q8N3P4 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC22.14■■□□□ 1.14
VPS8Q8N3P4 AC091769.1-201ENST00000619576 568 ntBASIC22.14■■□□□ 1.14
VPS8Q8N3P4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
VPS8Q8N3P4 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
VPS8Q8N3P4 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
VPS8Q8N3P4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC22.14■■□□□ 1.14
VPS8Q8N3P4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
VPS8Q8N3P4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC22.14■■□□□ 1.14
VPS8Q8N3P4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
VPS8Q8N3P4 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
VPS8Q8N3P4 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
VPS8Q8N3P4 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
VPS8Q8N3P4 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VPS8Q8N3P4 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
VPS8Q8N3P4 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
VPS8Q8N3P4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VPS8Q8N3P4 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC22.14■■□□□ 1.13
VPS8Q8N3P4 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VPS8Q8N3P4 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC22.14■■□□□ 1.13
VPS8Q8N3P4 AC025186.1-201ENST00000478174 870 ntBASIC22.14■■□□□ 1.13
VPS8Q8N3P4 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC22.14■■□□□ 1.13
VPS8Q8N3P4 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC22.14■■□□□ 1.13
VPS8Q8N3P4 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC22.14■■□□□ 1.13
VPS8Q8N3P4 AC087392.5-201ENST00000612517 489 ntBASIC22.14■■□□□ 1.13
VPS8Q8N3P4 AC073911.3-201ENST00000624401 631 ntBASIC22.14■■□□□ 1.13
VPS8Q8N3P4 AC011491.1-203ENST00000637688 543 ntBASIC22.14■■□□□ 1.13
VPS8Q8N3P4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
VPS8Q8N3P4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
VPS8Q8N3P4 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
VPS8Q8N3P4 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
VPS8Q8N3P4 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC22.14■■□□□ 1.13
VPS8Q8N3P4 FMO6P-201ENST00000236166 1620 ntBASIC22.13■■□□□ 1.13
VPS8Q8N3P4 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC22.13■■□□□ 1.13
VPS8Q8N3P4 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS8Q8N3P4 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
VPS8Q8N3P4 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS8Q8N3P4 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VPS8Q8N3P4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS8Q8N3P4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC22.13■■□□□ 1.13
VPS8Q8N3P4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS8Q8N3P4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS8Q8N3P4 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS8Q8N3P4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS8Q8N3P4 AL928654.5-201ENST00000624831 2501 ntBASIC22.13■■□□□ 1.13
VPS8Q8N3P4 AL928921.2-201ENST00000641325 2442 ntBASIC22.13■■□□□ 1.13
VPS8Q8N3P4 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC22.13■■□□□ 1.13
VPS8Q8N3P4 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VPS8Q8N3P4 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VPS8Q8N3P4 AC138761.6-201ENST00000583997 1423 ntBASIC22.13■■□□□ 1.13
VPS8Q8N3P4 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VPS8Q8N3P4 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
VPS8Q8N3P4 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms