Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 AC232323.1-201ENST00000540724 2099 ntBASIC17.73■□□□□ 0.43
COL23A1Q86Y22 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 AC008741.2-201ENST00000612792 3115 ntBASIC17.73■□□□□ 0.43
COL23A1Q86Y22 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 AC215219.1-201ENST00000400706 1817 ntBASIC17.73■□□□□ 0.43
COL23A1Q86Y22 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.73■□□□□ 0.43
COL23A1Q86Y22 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 RNU1-80P-201ENST00000459500 161 ntBASIC17.73■□□□□ 0.43
COL23A1Q86Y22 AC092910.2-201ENST00000491262 348 ntBASIC17.73■□□□□ 0.43
COL23A1Q86Y22 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 AL049840.2-201ENST00000602722 535 ntBASIC17.73■□□□□ 0.43
COL23A1Q86Y22 AL512324.3-201ENST00000619383 882 ntBASIC17.73■□□□□ 0.43
COL23A1Q86Y22 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL23A1Q86Y22 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 AC064801.2-201ENST00000625052 1303 ntBASIC17.72■□□□□ 0.43
COL23A1Q86Y22 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 FDPSP7-201ENST00000429043 1054 ntBASIC17.72■□□□□ 0.43
COL23A1Q86Y22 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 LY6E-215ENST00000523847 427 ntTSL 3 BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 KRT8P34-201ENST00000577607 1044 ntBASIC17.72■□□□□ 0.43
COL23A1Q86Y22 AC132812.1-201ENST00000583145 892 ntBASIC17.72■□□□□ 0.43
COL23A1Q86Y22 AP001462.1-201ENST00000594089 452 ntBASIC17.72■□□□□ 0.43
COL23A1Q86Y22 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
COL23A1Q86Y22 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL23A1Q86Y22 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL23A1Q86Y22 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.71■□□□□ 0.43
COL23A1Q86Y22 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.71■□□□□ 0.43
COL23A1Q86Y22 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL23A1Q86Y22 SALL4P6-201ENST00000429385 1691 ntBASIC17.71■□□□□ 0.43
COL23A1Q86Y22 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
COL23A1Q86Y22 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL23A1Q86Y22 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC17.71■□□□□ 0.43
COL23A1Q86Y22 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL23A1Q86Y22 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.71■□□□□ 0.43
COL23A1Q86Y22 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
COL23A1Q86Y22 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
COL23A1Q86Y22 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL23A1Q86Y22 AIG1-203ENST00000367596 559 ntTSL 2 BASIC17.71■□□□□ 0.43
COL23A1Q86Y22 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms