Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 AGGF1P10-201ENST00000635005 2191 ntBASIC12.09□□□□□ -0.47
ZNF546Q86UE3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 AC115284.2-201ENST00000624646 2054 ntBASIC12.09□□□□□ -0.47
ZNF546Q86UE3 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC12.09□□□□□ -0.47
ZNF546Q86UE3 AC011481.3-201ENST00000623895 5594 ntBASIC12.08□□□□□ -0.47
ZNF546Q86UE3 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
ZNF546Q86UE3 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
ZNF546Q86UE3 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 GHET1-201ENST00000627071 1906 ntBASIC12.08□□□□□ -0.48
ZNF546Q86UE3 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 ACTG1P14-201ENST00000446382 1122 ntBASIC12.08□□□□□ -0.48
ZNF546Q86UE3 KRT18P43-201ENST00000469825 1281 ntBASIC12.08□□□□□ -0.48
ZNF546Q86UE3 KRT8P48-201ENST00000515599 1220 ntBASIC12.08□□□□□ -0.48
ZNF546Q86UE3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 AC105021.1-202ENST00000570572 669 ntBASIC12.08□□□□□ -0.48
ZNF546Q86UE3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 AC015688.4-201ENST00000580780 1647 ntBASIC12.08□□□□□ -0.48
ZNF546Q86UE3 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
ZNF546Q86UE3 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 OR2I1P-208ENST00000641137 4948 ntBASIC12.07□□□□□ -0.48
ZNF546Q86UE3 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 SPDYE17-201ENST00000412399 783 ntBASIC12.07□□□□□ -0.48
ZNF546Q86UE3 AC074338.1-201ENST00000416825 156 ntBASIC12.07□□□□□ -0.48
ZNF546Q86UE3 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 KRT18P3-201ENST00000451602 1288 ntBASIC12.07□□□□□ -0.48
ZNF546Q86UE3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 AC027601.4-201ENST00000611259 610 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms