Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.91□□□□□ -0.18
RNF44Q7L0R7 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 AHCYP4-201ENST00000419201 1315 ntBASIC13.9□□□□□ -0.18
RNF44Q7L0R7 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 AC018629.1-201ENST00000623381 1736 ntBASIC13.9□□□□□ -0.18
RNF44Q7L0R7 AC090505.1-201ENST00000430515 1834 ntBASIC13.9□□□□□ -0.18
RNF44Q7L0R7 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.9□□□□□ -0.18
RNF44Q7L0R7 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 CALR4P-201ENST00000431943 946 ntBASIC13.9□□□□□ -0.18
RNF44Q7L0R7 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 RCC2P8-201ENST00000502779 1035 ntBASIC13.9□□□□□ -0.18
RNF44Q7L0R7 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF44Q7L0R7 AC064801.2-201ENST00000625052 1303 ntBASIC13.9□□□□□ -0.19
RNF44Q7L0R7 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 RN7SL832P-201ENST00000607781 1756 ntBASIC13.89□□□□□ -0.19
RNF44Q7L0R7 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 AL009178.2-201ENST00000597278 2719 ntBASIC13.89□□□□□ -0.19
RNF44Q7L0R7 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 AL008707.1-201ENST00000422498 534 ntBASIC13.89□□□□□ -0.19
RNF44Q7L0R7 FNTAP2-201ENST00000430308 634 ntBASIC13.89□□□□□ -0.19
RNF44Q7L0R7 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 OR2R1P-201ENST00000441404 914 ntBASIC13.89□□□□□ -0.19
RNF44Q7L0R7 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 HIST2H2BC-201ENST00000498492 580 ntBASIC13.89□□□□□ -0.19
RNF44Q7L0R7 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 NDUFV2P1-201ENST00000596415 907 ntBASIC13.89□□□□□ -0.19
RNF44Q7L0R7 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 AC100757.4-201ENST00000626934 759 ntBASIC13.89□□□□□ -0.19
RNF44Q7L0R7 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF44Q7L0R7 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms