Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 CLK3P2-201ENST00000427566 1453 ntBASIC11.59□□□□□ -0.55
FAM78BQ5VT40 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 AL136172.1-201ENST00000598590 1394 ntBASIC11.59□□□□□ -0.55
FAM78BQ5VT40 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 AC073957.3-201ENST00000609998 6758 ntBASIC11.59□□□□□ -0.55
FAM78BQ5VT40 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 PNMT-202ENST00000394246 821 ntTSL 2 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 AC241585.1-201ENST00000433527 519 ntBASIC11.59□□□□□ -0.55
FAM78BQ5VT40 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 AC092364.2-202ENST00000597012 1073 ntBASIC11.59□□□□□ -0.55
FAM78BQ5VT40 GPALPP1-207ENST00000611650 899 ntBASIC11.59□□□□□ -0.55
FAM78BQ5VT40 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 AC006538.3-201ENST00000612495 578 ntBASIC11.59□□□□□ -0.55
FAM78BQ5VT40 AL390754.1-201ENST00000619088 582 ntBASIC11.59□□□□□ -0.55
FAM78BQ5VT40 AL590560.3-201ENST00000623350 461 ntBASIC11.59□□□□□ -0.55
FAM78BQ5VT40 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 SLC9A3P3-201ENST00000457608 2229 ntBASIC11.59□□□□□ -0.55
FAM78BQ5VT40 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 AL138799.1-201ENST00000448213 1675 ntBASIC11.59□□□□□ -0.55
FAM78BQ5VT40 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 AC090643.2-201ENST00000623442 2029 ntBASIC11.59□□□□□ -0.55
FAM78BQ5VT40 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
FAM78BQ5VT40 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
FAM78BQ5VT40 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC11.58□□□□□ -0.55
FAM78BQ5VT40 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 DDC-213ENST00000617822 1809 ntTSL 3 BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 AC073869.1-201ENST00000415574 2762 ntBASIC11.58□□□□□ -0.56
FAM78BQ5VT40 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC11.58□□□□□ -0.56
FAM78BQ5VT40 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms