Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.86□□□□□ -0.03
ALFQ53S48 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ALFQ53S48 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.86□□□□□ -0.03
ALFQ53S48 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.86□□□□□ -0.03
ALFQ53S48 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.86□□□□□ -0.03
ALFQ53S48 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.86□□□□□ -0.03
ALFQ53S48 AC021016.3-201ENST00000608367 477 ntBASIC14.86□□□□□ -0.03
ALFQ53S48 AC091544.8-201ENST00000619490 361 ntBASIC14.86□□□□□ -0.03
ALFQ53S48 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ALFQ53S48 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.86□□□□□ -0.03
ALFQ53S48 KRT8P21-201ENST00000430398 1491 ntBASIC14.86□□□□□ -0.03
ALFQ53S48 LAP3P2-201ENST00000454686 1454 ntBASIC14.86□□□□□ -0.03
ALFQ53S48 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ALFQ53S48 AL157791.1-201ENST00000553667 1699 ntBASIC14.86□□□□□ -0.03
ALFQ53S48 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ALFQ53S48 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.86□□□□□ -0.03
ALFQ53S48 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.86□□□□□ -0.03
ALFQ53S48 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.86□□□□□ -0.03
ALFQ53S48 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
ALFQ53S48 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ALFQ53S48 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
ALFQ53S48 SNX18-202ENST00000343017 3140 ntBASIC14.86□□□□□ -0.03
ALFQ53S48 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
ALFQ53S48 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.85□□□□□ -0.03
ALFQ53S48 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ALFQ53S48 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ALFQ53S48 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ALFQ53S48 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ALFQ53S48 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
ALFQ53S48 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
ALFQ53S48 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.85□□□□□ -0.03
ALFQ53S48 AC027601.5-201ENST00000624065 2482 ntBASIC14.85□□□□□ -0.03
ALFQ53S48 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.85□□□□□ -0.03
ALFQ53S48 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ALFQ53S48 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.85□□□□□ -0.03
ALFQ53S48 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
ALFQ53S48 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ALFQ53S48 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ALFQ53S48 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ALFQ53S48 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
ALFQ53S48 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ALFQ53S48 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.85□□□□□ -0.03
ALFQ53S48 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ALFQ53S48 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ALFQ53S48 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ALFQ53S48 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
ALFQ53S48 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ALFQ53S48 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.85□□□□□ -0.03
ALFQ53S48 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.85□□□□□ -0.03
ALFQ53S48 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ALFQ53S48 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.85□□□□□ -0.03
ALFQ53S48 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.85□□□□□ -0.03
ALFQ53S48 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ALFQ53S48 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ALFQ53S48 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.85□□□□□ -0.03
ALFQ53S48 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
ALFQ53S48 AC100757.4-201ENST00000626934 759 ntBASIC14.85□□□□□ -0.03
ALFQ53S48 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.85□□□□□ -0.03
ALFQ53S48 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
ALFQ53S48 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
ALFQ53S48 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.85□□□□□ -0.03
ALFQ53S48 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
ALFQ53S48 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
ALFQ53S48 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
ALFQ53S48 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ALFQ53S48 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ALFQ53S48 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ALFQ53S48 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ALFQ53S48 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ALFQ53S48 AC152010.1-201ENST00000415779 2006 ntBASIC14.85□□□□□ -0.03
ALFQ53S48 AP002353.1-201ENST00000528257 1599 ntBASIC14.85□□□□□ -0.03
ALFQ53S48 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ALFQ53S48 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ALFQ53S48 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.85□□□□□ -0.03
ALFQ53S48 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.85□□□□□ -0.03
ALFQ53S48 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ALFQ53S48 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ALFQ53S48 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ALFQ53S48 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.84□□□□□ -0.03
ALFQ53S48 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
ALFQ53S48 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ALFQ53S48 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ALFQ53S48 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.84□□□□□ -0.03
ALFQ53S48 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ALFQ53S48 AC020910.6-201ENST00000623084 1459 ntBASIC14.84□□□□□ -0.03
ALFQ53S48 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ALFQ53S48 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
ALFQ53S48 AL022313.4-201ENST00000562756 2046 ntBASIC14.84□□□□□ -0.03
ALFQ53S48 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ALFQ53S48 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ALFQ53S48 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ALFQ53S48 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ALFQ53S48 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
ALFQ53S48 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.84□□□□□ -0.03
ALFQ53S48 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.84□□□□□ -0.03
ALFQ53S48 AC092580.1-201ENST00000433998 658 ntBASIC14.84□□□□□ -0.03
ALFQ53S48 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.84□□□□□ -0.03
ALFQ53S48 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.84□□□□□ -0.03
ALFQ53S48 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.84□□□□□ -0.03
ALFQ53S48 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms