Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC27Q2M243 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC27Q2M243 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC27Q2M243 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC27Q2M243 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC27Q2M243 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC27Q2M243 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC27Q2M243 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC27Q2M243 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC27Q2M243 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC27Q2M243 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC27Q2M243 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CCDC27Q2M243 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC27Q2M243 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC27Q2M243 ACTG1P2-201ENST00000415776 1125 ntBASIC18.68■□□□□ 0.58
CCDC27Q2M243 DEF8-202ENST00000418391 852 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC27Q2M243 ACTG1P11-201ENST00000425411 1125 ntBASIC18.68■□□□□ 0.58
CCDC27Q2M243 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC27Q2M243 GOLGA2P8-201ENST00000505201 779 ntBASIC18.68■□□□□ 0.58
CCDC27Q2M243 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC27Q2M243 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC27Q2M243 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CCDC27Q2M243 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC27Q2M243 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC27Q2M243 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC27Q2M243 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC27Q2M243 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC27Q2M243 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC27Q2M243 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC27Q2M243 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC27Q2M243 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC27Q2M243 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC27Q2M243 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC27Q2M243 AC126755.1-201ENST00000525846 6405 ntBASIC18.68■□□□□ 0.58
CCDC27Q2M243 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC27Q2M243 GOLGA8EP-201ENST00000530246 1959 ntBASIC18.68■□□□□ 0.58
CCDC27Q2M243 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC27Q2M243 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC27Q2M243 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC27Q2M243 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC27Q2M243 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC27Q2M243 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC27Q2M243 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC27Q2M243 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC27Q2M243 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC27Q2M243 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC27Q2M243 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC27Q2M243 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CCDC27Q2M243 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC27Q2M243 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC27Q2M243 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC27Q2M243 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC27Q2M243 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC27Q2M243 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC27Q2M243 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC27Q2M243 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC27Q2M243 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC27Q2M243 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC27Q2M243 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC27Q2M243 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC27Q2M243 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC27Q2M243 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC27Q2M243 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC27Q2M243 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC27Q2M243 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC27Q2M243 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC27Q2M243 KRT8P1-201ENST00000557533 1207 ntBASIC18.67■□□□□ 0.58
CCDC27Q2M243 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC27Q2M243 GPR182-203ENST00000622922 591 ntBASIC18.67■□□□□ 0.58
CCDC27Q2M243 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC27Q2M243 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC27Q2M243 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC27Q2M243 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CCDC27Q2M243 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
CCDC27Q2M243 AL590824.1-201ENST00000403828 1349 ntBASIC18.67■□□□□ 0.58
CCDC27Q2M243 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC27Q2M243 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC27Q2M243 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC27Q2M243 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC27Q2M243 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CCDC27Q2M243 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC27Q2M243 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC27Q2M243 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC27Q2M243 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC27Q2M243 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC27Q2M243 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC27Q2M243 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC27Q2M243 AC023794.5-201ENST00000564380 2157 ntBASIC18.66■□□□□ 0.58
CCDC27Q2M243 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC27Q2M243 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC27Q2M243 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CCDC27Q2M243 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC27Q2M243 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC27Q2M243 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC27Q2M243 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC27Q2M243 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC27Q2M243 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC27Q2M243 AC117489.1-201ENST00000625169 3217 ntBASIC18.66■□□□□ 0.58
CCDC27Q2M243 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC27Q2M243 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms