Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.96□□□□□ -0.33
ACTA1P68133 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.96□□□□□ -0.33
ACTA1P68133 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ACTA1P68133 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ACTA1P68133 AC068587.3-201ENST00000526613 355 ntBASIC12.96□□□□□ -0.33
ACTA1P68133 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.96□□□□□ -0.33
ACTA1P68133 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.96□□□□□ -0.33
ACTA1P68133 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.96□□□□□ -0.33
ACTA1P68133 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.96□□□□□ -0.33
ACTA1P68133 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.96□□□□□ -0.33
ACTA1P68133 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.96□□□□□ -0.33
ACTA1P68133 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.96□□□□□ -0.33
ACTA1P68133 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
ACTA1P68133 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ACTA1P68133 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
ACTA1P68133 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
ACTA1P68133 AL022313.4-201ENST00000562756 2046 ntBASIC12.96□□□□□ -0.34
ACTA1P68133 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.96□□□□□ -0.34
ACTA1P68133 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
ACTA1P68133 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.96□□□□□ -0.34
ACTA1P68133 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.96□□□□□ -0.34
ACTA1P68133 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.96□□□□□ -0.34
ACTA1P68133 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
ACTA1P68133 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.96□□□□□ -0.34
ACTA1P68133 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ACTA1P68133 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ACTA1P68133 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
ACTA1P68133 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
ACTA1P68133 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
ACTA1P68133 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ACTA1P68133 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ACTA1P68133 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACTA1P68133 KRT8P28-201ENST00000433288 1390 ntBASIC12.95□□□□□ -0.34
ACTA1P68133 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.95□□□□□ -0.34
ACTA1P68133 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.95□□□□□ -0.34
ACTA1P68133 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.95□□□□□ -0.34
ACTA1P68133 AC020910.5-201ENST00000623668 1865 ntBASIC12.95□□□□□ -0.34
ACTA1P68133 FP325330.2-201ENST00000624219 5630 ntBASIC12.95□□□□□ -0.34
ACTA1P68133 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACTA1P68133 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACTA1P68133 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACTA1P68133 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACTA1P68133 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ACTA1P68133 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
ACTA1P68133 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACTA1P68133 FKBP4P6-201ENST00000457486 1332 ntBASIC12.95□□□□□ -0.34
ACTA1P68133 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACTA1P68133 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACTA1P68133 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACTA1P68133 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACTA1P68133 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACTA1P68133 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACTA1P68133 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACTA1P68133 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
ACTA1P68133 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACTA1P68133 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ACTA1P68133 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACTA1P68133 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.95□□□□□ -0.34
ACTA1P68133 AK2P2-201ENST00000439142 405 ntBASIC12.95□□□□□ -0.34
ACTA1P68133 MYCLP2-201ENST00000449268 967 ntBASIC12.95□□□□□ -0.34
ACTA1P68133 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
ACTA1P68133 INGX-202ENST00000489074 768 ntBASIC12.95□□□□□ -0.34
ACTA1P68133 AC022137.2-201ENST00000503482 481 ntBASIC12.95□□□□□ -0.34
ACTA1P68133 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACTA1P68133 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.95□□□□□ -0.34
ACTA1P68133 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.95□□□□□ -0.34
ACTA1P68133 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12.95□□□□□ -0.34
ACTA1P68133 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.95□□□□□ -0.34
ACTA1P68133 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ACTA1P68133 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
ACTA1P68133 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACTA1P68133 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACTA1P68133 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACTA1P68133 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ACTA1P68133 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.95□□□□□ -0.34
ACTA1P68133 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACTA1P68133 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.95□□□□□ -0.34
ACTA1P68133 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.95□□□□□ -0.34
ACTA1P68133 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ACTA1P68133 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ACTA1P68133 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ACTA1P68133 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
ACTA1P68133 MIR193BHG-211ENST00000641433 5365 ntBASIC12.94□□□□□ -0.34
ACTA1P68133 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
ACTA1P68133 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.94□□□□□ -0.34
ACTA1P68133 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACTA1P68133 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACTA1P68133 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACTA1P68133 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACTA1P68133 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACTA1P68133 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
ACTA1P68133 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACTA1P68133 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.94□□□□□ -0.34
ACTA1P68133 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ACTA1P68133 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
ACTA1P68133 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.94□□□□□ -0.34
ACTA1P68133 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ACTA1P68133 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
ACTA1P68133 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.94□□□□□ -0.34
ACTA1P68133 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms