Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.23□□□□□ -0.29
CXCR4P61073 AC104794.3-201ENST00000566840 1248 ntBASIC13.23□□□□□ -0.29
CXCR4P61073 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.23□□□□□ -0.29
CXCR4P61073 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.23□□□□□ -0.29
CXCR4P61073 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CXCR4P61073 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CXCR4P61073 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CXCR4P61073 LINC01165-201ENST00000445190 1623 ntBASIC13.23□□□□□ -0.29
CXCR4P61073 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CXCR4P61073 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CXCR4P61073 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CXCR4P61073 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CXCR4P61073 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CXCR4P61073 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CXCR4P61073 AC022144.1-201ENST00000602255 1580 ntBASIC13.23□□□□□ -0.29
CXCR4P61073 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CXCR4P61073 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.23□□□□□ -0.29
CXCR4P61073 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.23□□□□□ -0.29
CXCR4P61073 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.23□□□□□ -0.29
CXCR4P61073 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC13.23□□□□□ -0.29
CXCR4P61073 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CXCR4P61073 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CXCR4P61073 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CXCR4P61073 AC131902.2-201ENST00000566892 2172 ntBASIC13.22□□□□□ -0.29
CXCR4P61073 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
CXCR4P61073 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.22□□□□□ -0.29
CXCR4P61073 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.22□□□□□ -0.29
CXCR4P61073 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
CXCR4P61073 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC13.22□□□□□ -0.29
CXCR4P61073 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CXCR4P61073 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
CXCR4P61073 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CXCR4P61073 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CXCR4P61073 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.22□□□□□ -0.29
CXCR4P61073 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.22□□□□□ -0.29
CXCR4P61073 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 AL445250.1-201ENST00000641671 2259 ntBASIC13.22□□□□□ -0.29
CXCR4P61073 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.22□□□□□ -0.29
CXCR4P61073 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.22□□□□□ -0.29
CXCR4P61073 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CXCR4P61073 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.22□□□□□ -0.29
CXCR4P61073 GIMAP3P-201ENST00000495150 836 ntBASIC13.22□□□□□ -0.29
CXCR4P61073 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.22□□□□□ -0.29
CXCR4P61073 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.22□□□□□ -0.29
CXCR4P61073 TPRX2P-201ENST00000535362 881 ntBASIC13.22□□□□□ -0.29
CXCR4P61073 DUX4L27-201ENST00000554796 1261 ntBASIC13.22□□□□□ -0.29
CXCR4P61073 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.22□□□□□ -0.29
CXCR4P61073 AC023310.3-201ENST00000557027 670 ntBASIC13.22□□□□□ -0.29
CXCR4P61073 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 AC100756.1-201ENST00000562736 682 ntBASIC13.22□□□□□ -0.29
CXCR4P61073 AC138749.3-201ENST00000567691 622 ntBASIC13.22□□□□□ -0.29
CXCR4P61073 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
CXCR4P61073 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.22□□□□□ -0.29
CXCR4P61073 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.22□□□□□ -0.29
CXCR4P61073 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.22□□□□□ -0.29
CXCR4P61073 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC13.22□□□□□ -0.29
CXCR4P61073 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.22□□□□□ -0.29
CXCR4P61073 AC116165.1-201ENST00000611806 668 ntBASIC13.22□□□□□ -0.29
CXCR4P61073 AC007431.3-201ENST00000623221 587 ntBASIC13.22□□□□□ -0.29
CXCR4P61073 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.22□□□□□ -0.29
CXCR4P61073 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.22□□□□□ -0.29
CXCR4P61073 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC13.22□□□□□ -0.29
CXCR4P61073 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 PDIA3P1-201ENST00000471856 1510 ntBASIC13.22□□□□□ -0.29
CXCR4P61073 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.22□□□□□ -0.29
CXCR4P61073 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 MSNP1-201ENST00000511640 1732 ntBASIC13.22□□□□□ -0.29
CXCR4P61073 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.22□□□□□ -0.29
CXCR4P61073 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CXCR4P61073 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.22□□□□□ -0.29
CXCR4P61073 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CXCR4P61073 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CXCR4P61073 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CXCR4P61073 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms