Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ERVFC1-1P60608 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC11.35□□□□□ -0.59
ERVFC1-1P60608 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ERVFC1-1P60608 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ERVFC1-1P60608 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ERVFC1-1P60608 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
ERVFC1-1P60608 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
ERVFC1-1P60608 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
ERVFC1-1P60608 AC010536.1-201ENST00000538868 2611 ntBASIC11.35□□□□□ -0.59
ERVFC1-1P60608 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ERVFC1-1P60608 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ERVFC1-1P60608 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
ERVFC1-1P60608 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
ERVFC1-1P60608 AC011840.2-201ENST00000563063 1520 ntBASIC11.35□□□□□ -0.59
ERVFC1-1P60608 REM2-202ENST00000536884 1331 ntTSL 2 BASIC11.35□□□□□ -0.59
ERVFC1-1P60608 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 FAM90A11P-201ENST00000518378 2218 ntBASIC11.34□□□□□ -0.59
ERVFC1-1P60608 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 GGCT-205ENST00000409436 954 ntTSL 3 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 CNN2P11-201ENST00000429351 262 ntBASIC11.34□□□□□ -0.59
ERVFC1-1P60608 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 FAM58CP-201ENST00000435741 640 ntBASIC11.34□□□□□ -0.59
ERVFC1-1P60608 METTL21AP1-201ENST00000438852 635 ntBASIC11.34□□□□□ -0.59
ERVFC1-1P60608 AC074386.1-202ENST00000463561 864 ntBASIC11.34□□□□□ -0.59
ERVFC1-1P60608 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 AC068137.2-201ENST00000605408 478 ntBASIC11.34□□□□□ -0.59
ERVFC1-1P60608 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 AR-208ENST00000612452 10676 ntTSL 5 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 AC110048.1-201ENST00000604293 2157 ntBASIC11.34□□□□□ -0.59
ERVFC1-1P60608 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
ERVFC1-1P60608 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.59
ERVFC1-1P60608 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC11.33□□□□□ -0.59
ERVFC1-1P60608 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 AC022497.1-201ENST00000624916 3691 ntBASIC11.33□□□□□ -0.6
ERVFC1-1P60608 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms