Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.07□□□□□ -0.32
SUMO3P55854 NKAIN1P1-201ENST00000435754 582 ntBASIC13.07□□□□□ -0.32
SUMO3P55854 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SUMO3P55854 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.07□□□□□ -0.32
SUMO3P55854 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.07□□□□□ -0.32
SUMO3P55854 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.07□□□□□ -0.32
SUMO3P55854 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SUMO3P55854 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.07□□□□□ -0.32
SUMO3P55854 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.07□□□□□ -0.32
SUMO3P55854 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SUMO3P55854 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SUMO3P55854 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SUMO3P55854 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
SUMO3P55854 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SUMO3P55854 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SUMO3P55854 AL590824.1-201ENST00000403828 1349 ntBASIC13.07□□□□□ -0.32
SUMO3P55854 SHMT1P1-201ENST00000419974 1312 ntBASIC13.07□□□□□ -0.32
SUMO3P55854 AL365209.1-201ENST00000624418 6473 ntBASIC13.07□□□□□ -0.32
SUMO3P55854 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.07□□□□□ -0.32
SUMO3P55854 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SUMO3P55854 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.07□□□□□ -0.32
SUMO3P55854 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SUMO3P55854 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.07□□□□□ -0.32
SUMO3P55854 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SUMO3P55854 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SUMO3P55854 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.06□□□□□ -0.32
SUMO3P55854 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SUMO3P55854 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.06□□□□□ -0.32
SUMO3P55854 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
SUMO3P55854 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.06□□□□□ -0.32
SUMO3P55854 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.06□□□□□ -0.32
SUMO3P55854 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.06□□□□□ -0.32
SUMO3P55854 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
SUMO3P55854 RN7SKP214-201ENST00000364208 315 ntBASIC13.06□□□□□ -0.32
SUMO3P55854 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.06□□□□□ -0.32
SUMO3P55854 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.06□□□□□ -0.32
SUMO3P55854 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.06□□□□□ -0.32
SUMO3P55854 EIF4HP1-201ENST00000453115 687 ntBASIC13.06□□□□□ -0.32
SUMO3P55854 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SUMO3P55854 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.06□□□□□ -0.32
SUMO3P55854 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.06□□□□□ -0.32
SUMO3P55854 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.06□□□□□ -0.32
SUMO3P55854 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
SUMO3P55854 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.06□□□□□ -0.32
SUMO3P55854 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.06□□□□□ -0.32
SUMO3P55854 AC020914.3-201ENST00000594712 304 ntBASIC13.06□□□□□ -0.32
SUMO3P55854 AC243960.2-201ENST00000600996 747 ntBASIC13.06□□□□□ -0.32
SUMO3P55854 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.06□□□□□ -0.32
SUMO3P55854 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SUMO3P55854 C8orf49-201ENST00000525043 1968 ntBASIC13.06□□□□□ -0.32
SUMO3P55854 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.06□□□□□ -0.32
SUMO3P55854 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SUMO3P55854 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.06□□□□□ -0.32
SUMO3P55854 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SUMO3P55854 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.06□□□□□ -0.32
SUMO3P55854 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SUMO3P55854 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SUMO3P55854 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.06□□□□□ -0.32
SUMO3P55854 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SUMO3P55854 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SUMO3P55854 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.05□□□□□ -0.32
SUMO3P55854 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SUMO3P55854 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SUMO3P55854 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SUMO3P55854 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SUMO3P55854 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SUMO3P55854 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SUMO3P55854 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.05□□□□□ -0.32
SUMO3P55854 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.05□□□□□ -0.32
SUMO3P55854 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SUMO3P55854 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SUMO3P55854 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SUMO3P55854 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms