Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA3P52797 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.53□□□□□ -0.24
EFNA3P52797 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.53□□□□□ -0.24
EFNA3P52797 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
EFNA3P52797 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA3P52797 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.53□□□□□ -0.24
EFNA3P52797 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.53□□□□□ -0.24
EFNA3P52797 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA3P52797 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA3P52797 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.53□□□□□ -0.24
EFNA3P52797 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.53□□□□□ -0.24
EFNA3P52797 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA3P52797 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA3P52797 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA3P52797 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.53□□□□□ -0.24
EFNA3P52797 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
EFNA3P52797 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.53□□□□□ -0.24
EFNA3P52797 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.52□□□□□ -0.24
EFNA3P52797 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
EFNA3P52797 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
EFNA3P52797 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
EFNA3P52797 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
EFNA3P52797 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
EFNA3P52797 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.52□□□□□ -0.24
EFNA3P52797 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
EFNA3P52797 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
EFNA3P52797 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.52□□□□□ -0.24
EFNA3P52797 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
EFNA3P52797 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
EFNA3P52797 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
EFNA3P52797 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
EFNA3P52797 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC13.52□□□□□ -0.25
EFNA3P52797 AC007274.2-201ENST00000421675 662 ntBASIC13.52□□□□□ -0.25
EFNA3P52797 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC13.52□□□□□ -0.25
EFNA3P52797 AL133466.1-201ENST00000447582 150 ntBASIC13.52□□□□□ -0.25
EFNA3P52797 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.52□□□□□ -0.25
EFNA3P52797 AC005586.2-201ENST00000563946 837 ntBASIC13.52□□□□□ -0.25
EFNA3P52797 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.52□□□□□ -0.25
EFNA3P52797 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
EFNA3P52797 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
EFNA3P52797 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
EFNA3P52797 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
EFNA3P52797 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
EFNA3P52797 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.52□□□□□ -0.25
EFNA3P52797 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
EFNA3P52797 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
EFNA3P52797 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.52□□□□□ -0.25
EFNA3P52797 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
EFNA3P52797 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.52□□□□□ -0.25
EFNA3P52797 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
EFNA3P52797 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
EFNA3P52797 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.52□□□□□ -0.25
EFNA3P52797 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.52□□□□□ -0.25
EFNA3P52797 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
EFNA3P52797 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
EFNA3P52797 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
EFNA3P52797 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.52□□□□□ -0.25
EFNA3P52797 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.52□□□□□ -0.25
EFNA3P52797 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
EFNA3P52797 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
EFNA3P52797 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.51□□□□□ -0.25
EFNA3P52797 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
EFNA3P52797 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
EFNA3P52797 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.51□□□□□ -0.25
EFNA3P52797 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.51□□□□□ -0.25
EFNA3P52797 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
EFNA3P52797 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
EFNA3P52797 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
EFNA3P52797 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.51□□□□□ -0.25
EFNA3P52797 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
EFNA3P52797 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
EFNA3P52797 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
EFNA3P52797 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
EFNA3P52797 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
EFNA3P52797 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
EFNA3P52797 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
EFNA3P52797 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
EFNA3P52797 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.51□□□□□ -0.25
EFNA3P52797 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.51□□□□□ -0.25
EFNA3P52797 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.51□□□□□ -0.25
EFNA3P52797 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.51□□□□□ -0.25
EFNA3P52797 AC006335.1-201ENST00000445200 547 ntBASIC13.51□□□□□ -0.25
EFNA3P52797 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC13.51□□□□□ -0.25
EFNA3P52797 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.51□□□□□ -0.25
EFNA3P52797 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.51□□□□□ -0.25
EFNA3P52797 AC026803.1-201ENST00000569130 274 ntBASIC13.51□□□□□ -0.25
EFNA3P52797 MIR3907-201ENST00000579424 151 ntBASIC13.51□□□□□ -0.25
EFNA3P52797 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13.51□□□□□ -0.25
EFNA3P52797 MIR3188-201ENST00000583494 85 ntBASIC13.51□□□□□ -0.25
EFNA3P52797 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
EFNA3P52797 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.51□□□□□ -0.25
EFNA3P52797 AC016629.1-201ENST00000596579 586 ntBASIC13.51□□□□□ -0.25
EFNA3P52797 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.51□□□□□ -0.25
EFNA3P52797 AC015656.1-201ENST00000624209 3578 ntBASIC13.51□□□□□ -0.25
EFNA3P52797 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
EFNA3P52797 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
EFNA3P52797 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
EFNA3P52797 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
EFNA3P52797 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
EFNA3P52797 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms