Protein–RNA interactions for Protein: P51801

CLCNKB, Chloride channel protein ClC-Kb, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKBP51801 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCNKBP51801 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCNKBP51801 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCNKBP51801 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCNKBP51801 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCNKBP51801 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCNKBP51801 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCNKBP51801 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CLCNKBP51801 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCNKBP51801 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCNKBP51801 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCNKBP51801 MIR645-201ENST00000385283 94 ntBASIC15.35■□□□□ 0.05
CLCNKBP51801 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CLCNKBP51801 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CLCNKBP51801 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCNKBP51801 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.35■□□□□ 0.05
CLCNKBP51801 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCNKBP51801 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCNKBP51801 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCNKBP51801 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.35■□□□□ 0.05
CLCNKBP51801 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCNKBP51801 AC008267.1-201ENST00000474858 1069 ntBASIC15.35■□□□□ 0.05
CLCNKBP51801 MRPL22P1-201ENST00000505398 616 ntBASIC15.35■□□□□ 0.05
CLCNKBP51801 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CLCNKBP51801 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCNKBP51801 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.35■□□□□ 0.05
CLCNKBP51801 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCNKBP51801 COX6A1P2-201ENST00000620597 330 ntBASIC15.35■□□□□ 0.05
CLCNKBP51801 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CLCNKBP51801 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCNKBP51801 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CLCNKBP51801 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CLCNKBP51801 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCNKBP51801 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCNKBP51801 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCNKBP51801 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCNKBP51801 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CLCNKBP51801 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCNKBP51801 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCNKBP51801 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCNKBP51801 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCNKBP51801 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCNKBP51801 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCNKBP51801 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 LINC00552-201ENST00000625151 2579 ntBASIC15.34■□□□□ 0.05
CLCNKBP51801 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.34■□□□□ 0.05
CLCNKBP51801 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CLCNKBP51801 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.34■□□□□ 0.05
CLCNKBP51801 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
CLCNKBP51801 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CLCNKBP51801 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CLCNKBP51801 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CLCNKBP51801 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CLCNKBP51801 CHCHD2P9-201ENST00000461726 456 ntBASIC15.34■□□□□ 0.05
CLCNKBP51801 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.34■□□□□ 0.05
CLCNKBP51801 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.34■□□□□ 0.05
CLCNKBP51801 AP002803.1-201ENST00000528836 498 ntBASIC15.34■□□□□ 0.05
CLCNKBP51801 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CLCNKBP51801 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.34■□□□□ 0.05
CLCNKBP51801 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.34■□□□□ 0.05
CLCNKBP51801 MIR6842-201ENST00000612539 65 ntBASIC15.34■□□□□ 0.05
CLCNKBP51801 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 LINC00115-201ENST00000473798 1317 ntBASIC15.34■□□□□ 0.05
CLCNKBP51801 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CLCNKBP51801 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CLCNKBP51801 AL022313.4-201ENST00000562756 2046 ntBASIC15.34■□□□□ 0.05
CLCNKBP51801 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CLCNKBP51801 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
CLCNKBP51801 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.34■□□□□ 0.05
CLCNKBP51801 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCNKBP51801 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLCNKBP51801 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.33■□□□□ 0.05
CLCNKBP51801 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLCNKBP51801 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLCNKBP51801 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLCNKBP51801 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms