Protein–RNA interactions for Protein: P49918

CDKN1C, Cyclin-dependent kinase inhibitor 1C, humanhuman

Predicted RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1CP49918 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.38□□□□□ -0.11
CDKN1CP49918 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN1CP49918 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.38□□□□□ -0.11
CDKN1CP49918 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.38□□□□□ -0.11
CDKN1CP49918 AC124068.2-201ENST00000569473 1109 ntBASIC14.38□□□□□ -0.11
CDKN1CP49918 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.38□□□□□ -0.11
CDKN1CP49918 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN1CP49918 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN1CP49918 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CDKN1CP49918 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN1CP49918 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN1CP49918 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN1CP49918 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN1CP49918 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.38□□□□□ -0.11
CDKN1CP49918 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDKN1CP49918 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
CDKN1CP49918 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN1CP49918 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CDKN1CP49918 TUBB8P4-201ENST00000511806 1324 ntBASIC14.38□□□□□ -0.11
CDKN1CP49918 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN1CP49918 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN1CP49918 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.38□□□□□ -0.11
CDKN1CP49918 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CDKN1CP49918 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN1CP49918 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN1CP49918 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKN1CP49918 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
CDKN1CP49918 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKN1CP49918 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKN1CP49918 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDKN1CP49918 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.37□□□□□ -0.11
CDKN1CP49918 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.37□□□□□ -0.11
CDKN1CP49918 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKN1CP49918 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CDKN1CP49918 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.37□□□□□ -0.11
CDKN1CP49918 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.37□□□□□ -0.11
CDKN1CP49918 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKN1CP49918 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.37□□□□□ -0.11
CDKN1CP49918 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKN1CP49918 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKN1CP49918 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.37□□□□□ -0.11
CDKN1CP49918 MIR6752-201ENST00000618442 71 ntBASIC14.37□□□□□ -0.11
CDKN1CP49918 AL023803.2-201ENST00000620080 638 ntBASIC14.37□□□□□ -0.11
CDKN1CP49918 AC133540.1-201ENST00000620845 1019 ntBASIC14.37□□□□□ -0.11
CDKN1CP49918 AC092299.1-201ENST00000632679 757 ntBASIC14.37□□□□□ -0.11
CDKN1CP49918 AC068587.8-201ENST00000641239 219 ntBASIC14.37□□□□□ -0.11
CDKN1CP49918 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKN1CP49918 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKN1CP49918 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKN1CP49918 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKN1CP49918 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKN1CP49918 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKN1CP49918 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKN1CP49918 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKN1CP49918 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN1CP49918 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.36□□□□□ -0.11
CDKN1CP49918 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN1CP49918 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN1CP49918 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.36□□□□□ -0.11
CDKN1CP49918 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN1CP49918 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN1CP49918 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN1CP49918 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CDKN1CP49918 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
CDKN1CP49918 AC018629.1-201ENST00000623381 1736 ntBASIC14.36□□□□□ -0.11
CDKN1CP49918 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKN1CP49918 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms